gw1.140.37.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.140.37.1 T007262_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.709 0.731
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.709 0.731
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.709 0.731
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.694 0.731
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.687 0.731
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.140.37.1 AP2 1 53

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.357.22.1 Physcomitrella patens e_gw1.357.22.1 I 0.753
Cla009821 Citrullus lanatus Cla009821 I 0.721
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I 0.711
ERF5 Arabidopsis thaliana AT5G47230 D 0.709
Thhalv10000931m.g Eutrema salsugineum Thhalv10000931m.g I 0.709
ERF5 Arabidopsis lyrata fgenesh2_kg.8__69__AT5G47230.1 I 0.709
Cagra.3675s0006 Capsella grandiflora Cagra.3675s0006 I 0.706
Carubv10028472m.g Capsella rubella Carubv10028472m.g I 0.706
Bo9g069410 Brassica oleracea Bo9g069410 I 0.705
AMTR_s00148p00084540 Amborella trichopoda AMTR_s00148p00084540 I 0.704
Gorai.008G232600 Gossypium raimondii Gorai.008G232600 I 0.703
GLYMA17G15460 Glycine max GLYMA17G15460 I 0.702
LjT33A04.100.nc Lotus japonicus LjT33A04.100.nc I 0.702
SapurV1A.1153s0060 Salix purpurea SapurV1A.1153s0060 I 0.702
Pm023378 Prunus mume Pm023378 I 0.702
SapurV1A.1425s0060 Salix purpurea SapurV1A.1425s0060 I 0.702
PRUPE_ppa007892mg Prunus persica PRUPE_ppa007892mg I 0.702
GLYMA05G05130 Glycine max GLYMA05G05130 I 0.701
GLYMA11G03900 Glycine max GLYMA11G03900 I 0.701
Ca_12774 Cicer arietinum Ca_12774 I 0.701
Gorai.008G232700 Gossypium raimondii Gorai.008G232700 I 0.700
MDP0000791464 Malus domestica MDP0000791464 I 0.699
MDP0000309801 Malus domestica MDP0000309801 I 0.699
MDP0000240840 Malus domestica MDP0000240840 I 0.699
AMTR_s00111p00113030 Amborella trichopoda AMTR_s00111p00113030 I 0.699
MDP0000923579 Malus domestica MDP0000923579 I 0.699
cassava33325.m1 Manihot esculenta cassava33325.m1 I 0.699
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.699
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.698
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.698
AMTR_s00021p00184450 Amborella trichopoda AMTR_s00021p00184450 I 0.697
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.696
Eucgr.D02111 Eucalyptus grandis Eucgr.D02111 I 0.696
mgf002457m Mimulus guttatus mgf002457m I 0.696
29900.m001559 Ricinus communis 29900.m001559 I 0.695
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I 0.695
Ciclev10016995m.g Citrus clementina Ciclev10016995m.g I 0.694
ERF5_TOBAC Nicotiana tabacum ERF5_TOBAC D 0.694
orange1.1g031071m.g Citrus sinensis orange1.1g031071m.g I 0.694
evm.TU.supercontig_89.42 Carica papaya evm.TU.supercontig_89.42 I 0.694
28552.m000029 Ricinus communis 28552.m000029 I 0.693
Solyc08g078190.1 Solanum lycopersicum Solyc08g078190.1 I 0.693
MTR_4g100420 Medicago truncatula MTR_4g100420 I 0.693
cassava4888.m1 Manihot esculenta cassava4888.m1 I 0.692
Pavir.J11205 Panicum virgatum Pavir.J11205 I 0.692
Ca_00359 Cicer arietinum Ca_00359 I 0.692
Pm010367 Prunus mume Pm010367 I 0.690
Pavir.J29117 Panicum virgatum Pavir.J29117 I 0.690
Pavir.J24236 Panicum virgatum Pavir.J24236 I 0.690
PRUPE_ppa022010mg Prunus persica PRUPE_ppa022010mg I 0.690
Bra017493 Brassica rapa Bra017493 I 0.690
CM1489.90.nc Lotus japonicus CM1489.90.nc I 0.689
Aquca_005_00143 Aquilegia coerulea Aquca_005_00143 I 0.689
Cla005706 Citrullus lanatus Cla005706 I 0.689
GLYMA15G08560 Glycine max GLYMA15G08560 I 0.689
MTR_2g015040 Medicago truncatula MTR_2g015040 I 0.689
PRUPE_ppa012014mg Prunus persica PRUPE_ppa012014mg I 0.689
GLYMA13G30720 Glycine max GLYMA13G30720 I 0.689
Pm010368 Prunus mume Pm010368 I 0.689
orange1.1g037347m.g Citrus sinensis orange1.1g037347m.g I 0.688
CM1489.100.nc Lotus japonicus CM1489.100.nc I 0.688
Eucgr.E02652 Eucalyptus grandis Eucgr.E02652 I 0.688
evm.TU.supercontig_7.36 Carica papaya evm.TU.supercontig_7.36 I 0.688
Eucgr.E03167 Eucalyptus grandis Eucgr.E03167 I 0.688
cassava3045.m1 Manihot esculenta cassava3045.m1 I 0.688
Ciclev10018130m.g Citrus clementina Ciclev10018130m.g I 0.688
GLYMA13G30710 Glycine max GLYMA13G30710 I 0.688
TCM_029772 Theobroma cacao TCM_029772 I 0.688
Lus10003562.g Linum usitatissimum Lus10003562.g I 0.687
PK02330.1 Cannabis sativa PK02330.1 D 0.687
MTR_4g100450 Medicago truncatula MTR_4g100450 I 0.687
Lus10033885.g Linum usitatissimum Lus10033885.g I 0.687
GLYMA15G08580 Glycine max GLYMA15G08580 I 0.686
VIT_10s0003g00590 Vitis vinifera VIT_10s0003g00590 I 0.686
Lus10004752.g Linum usitatissimum Lus10004752.g I 0.684
gene10845-v1.0-hybrid Fragaria vesca gene10845-v1.0-hybrid I 0.684
gw1.13.222.1 Physcomitrella patens gw1.13.222.1 I 0.684
MDP0000755622 Malus domestica MDP0000755622 I 0.683
MDP0000143745 Malus domestica MDP0000143745 I 0.683
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.682
Bo7g077410 Brassica oleracea Bo7g077410 I 0.681
Bra024953 Brassica rapa Bra024953 I 0.681
Gorai.009G165500 Gossypium raimondii Gorai.009G165500 I 0.680
Eucgr.E00377 Eucalyptus grandis Eucgr.E00377 I 0.680
orange1.1g023209m.g Citrus sinensis orange1.1g023209m.g I 0.679
BGIOSGA004470 Oryza indica BGIOSGA004470 I 0.679
OMERI01G28260 Oryza meridionalis OMERI01G28260 I 0.679
Pavir.Ea03031 Panicum virgatum Pavir.Ea03031 I 0.679
OPUNC01G30160 Oryza punctata OPUNC01G30160 I 0.679
ORUFI01G34250 Oryza rufipogon ORUFI01G34250 I 0.679
ONIVA01G35550 Oryza nivara ONIVA01G35550 I 0.679
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.679
Ciclev10005570m.g Citrus clementina Ciclev10005570m.g I 0.679
OS01G0752500 Oryza sativa OS01G0752500 I 0.679
BGIOSGA033447 Oryza indica BGIOSGA033447 I 0.678
27401.m000291 Ricinus communis 27401.m000291 I 0.678
Gorai.010G156500 Gossypium raimondii Gorai.010G156500 I 0.678
OBART10G18670 Oryza barthii OBART10G18670 I 0.678
OPUNC10G17040 Oryza punctata OPUNC10G17040 I 0.678
GSMUA_Achr2G10490_001 Musa acuminata GSMUA_Achr2G10490_001 I 0.678
ORGLA10G0138000 Oryza glaberrima ORGLA10G0138000 I 0.678
MDP0000430682 Malus domestica MDP0000430682 I 0.677
Thhalv10005566m.g Eutrema salsugineum Thhalv10005566m.g I 0.677
ERF104 Arabidopsis lyrata fgenesh2_kg.8__2143__AT5G61600.1 I 0.677
Pavir.Eb03148 Panicum virgatum Pavir.Eb03148 I 0.677