gw1.14.214.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.14.214.1 T007263_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.8.141.1
M01642_2.00
Physcomitrella patens
CACCGACM

KGTCGGTG
PBM
Weirauch et al.(2014)
pTH8456
0.736 0.958
estExt_gwp_gw1.C_550163
M01640_2.00
Physcomitrella patens
NCACCGACHN

NDGTCGGTGN
PBM
Weirauch et al.(2014)
pTH8472
0.723 0.875
Q8LKX0_MAIZE
M09722_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DBF2_01
0.695 0.771
estExt_fgenesh1_pg.C_4800009
M01639_2.00
Physcomitrella patens
MACCGACM

KGTCGGTK
PBM
Weirauch et al.(2014)
pTH8488
0.681 0.854
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.14.214.1 AP2 1 50

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000007811 Ailuropoda melanoleuca ENSAMEG00000007811 N 0.000
ENSP00000223459-D1 Bos grunniens ENSP00000223459-D1 N 0.000
ZNF688 Bos taurus ENSBTAG00000019357 N 0.000
ZNF688 Callithrix jacchus ENSCJAG00000002695 N 0.000
ZNF688 Canis familiaris ENSCAFG00000029440 N 0.000
ENSCSAG00000005872 Chlorocebus sabaeus ENSCSAG00000005872 N 0.000
ENSDORG00000009873 Dipodomys ordii ENSDORG00000009873 N 0.000
ZNF688 Echinops telfairi ENSETEG00000018350 N 0.000
ZNF688 Equus caballus ENSECAG00000006619 N 0.000
ZNF688 Felis catus ENSFCAG00000029527 N 0.000
ZNF688 Gorilla gorilla ENSGGOG00000022609 N 0.000
ZNF688 Homo sapiens ENSG00000229809 N 0.000
ENSSTOG00000013283 Ictidomys tridecemlineatus ENSSTOG00000013283 N 0.000
ZNF688 Loxodonta africana ENSLAFG00000013608 N 0.000
ZNF688 Macaca mulatta ENSMMUG00000001122 N 0.000
ENSMPUG00000012305 Mustela putorius furo ENSMPUG00000012305 N 0.000
Zfp688 Mus musculus ENSMUSG00000045251 N 0.000
ZNF688 Myotis lucifugus ENSMLUG00000016466 N 0.000
ENSNLEG00000000140 Nomascus leucogenys ENSNLEG00000000140 N 0.000
ZNF688 Oryctolagus cuniculus ENSOCUG00000015416 N 0.000
ZNF688 Otolemur garnettii ENSOGAG00000033699 N 0.000
ENSOARG00000006773 Ovis aries ENSOARG00000006773 N 0.000
ZNF688 Pan troglodytes ENSPTRG00000041892 N 0.000
ENSPANG00000021149 Papio anubis ENSPANG00000021149 N 0.000
Zfp688 Rattus norvegicus ENSRNOG00000018379 N 0.000
ZNF688 Sorex araneus ENSSARG00000008749 N 0.000