gw1.7.372.1 (Chlorella NC64A)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.7.372.1 T007308_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.683 0.767
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.7.372.1 AP2 1 45

Links

Other AP2 family TFs
Other Chlorella NC64A TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
POPTR_0002s16900 Populus trichocarpa POPTR_0002s16900 I 0.689
SapurV1A.0013s0740 Salix purpurea SapurV1A.0013s0740 I 0.689
POPTR_0014s09020 Populus trichocarpa POPTR_0014s09020 I 0.689
GRMZM2G138396 Zea mays GRMZM2G138396 I 0.685
OPUNC08G15760 Oryza punctata OPUNC08G15760 I 0.683
ORUFI08G20040 Oryza rufipogon ORUFI08G20040 I 0.683
ONIVA08G19930 Oryza nivara ONIVA08G19930 I 0.683
OS08G0474000 Oryza sativa OS08G0474000 I 0.683
LOC_Os08g36920 Oryza sativa LOC_Os08g36920 D 0.683
OLONG_013554 Oryza longistaminata OLONG_013554 I 0.683
OGLUM08G18720 Oryza glumaepatula OGLUM08G18720 I 0.683
LPERR09G09240 Leersia perrieri LPERR09G09240 I 0.683
Sb02g026630 Sorghum bicolor Sb02g026630 I 0.682
PRUPE_ppa017002mg Prunus persica PRUPE_ppa017002mg I 0.681
VIT_06s0004g08190 Vitis vinifera VIT_06s0004g08190 I 0.681
GRMZM2G369472 Zea mays GRMZM2G369472 I 0.680
BRADI3G38140 Brachypodium distachyon BRADI3G38140 I 0.680
Sb07g023030 Sorghum bicolor Sb07g023030 I 0.680
Pavir.Fa00656 Panicum virgatum Pavir.Fa00656 I 0.679
OB08G25030 Oryza brachyantha OB08G25030 I 0.679
SapurV1A.0099s0060 Salix purpurea SapurV1A.0099s0060 I 0.679
28049.m000300 Ricinus communis 28049.m000300 I 0.678
Ciclev10028930m.g Citrus clementina Ciclev10028930m.g I 0.677