gw1.8.141.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.8.141.1 T007310_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.8.141.1
M01642_2.00
Physcomitrella patens
CACCGACM

KGTCGGTG
PBM
Weirauch et al.(2014)
pTH8456
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_gwp_gw1.C_550163
M01640_2.00
Physcomitrella patens
NCACCGACHN

NDGTCGGTGN
PBM
Weirauch et al.(2014)
pTH8472
0.714 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01642_2.00 AP2 8 59

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.8.141.1 AP2 8 59

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

Invalid Input OrderBy

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action