mgf008907m (Mimulus guttatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 mgf008907m T007346_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.698 0.724
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.698 0.724
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.684 0.724
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.684 0.724
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.680 0.714
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.680 0.714
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.677 0.714
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.677 0.714
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf008907m AP2 158 218
mgf008907m AP2 260 312

Links

Other AP2 family TFs
Other Mimulus guttatus TFs

474 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R014790 Calypte anna Aan_R014790 N 0.000
Afo_R009725 Aptenodytes forsteri Afo_R009725 N 0.000
Alligator_sinensis_CCG014201.1 Alligator sinensis Alligator_sinensis_CCG014201.1 N 0.000
Brh_R001107 Buceros rhinoceros Brh_R001107 N 0.000
Cmyd_10008461 Chelonia mydas Cmyd_10008461 I 0.000
ENSAMEG00000011926 Ailuropoda melanoleuca ENSAMEG00000011926 N 0.000
ENSAPLG00000012837 Anas platyrhynchos ENSAPLG00000012837 N 0.000
ENSBTAP00000019581-D1 Bos grunniens ENSBTAP00000019581-D1 N 0.000
ENSCJAG00000036263 Callithrix jacchus ENSCJAG00000036263 N 0.000
ENSFALG00000010237 Ficedula albicollis ENSFALG00000010237 N 0.000
ENSLOCG00000016212 Lepisosteus oculatus ENSLOCG00000016212 N 0.000
ENSMMUG00000006501 Macaca mulatta ENSMMUG00000006501 I 0.000
ENSMMUP00000039187 Macaca fascicularis ENSMMUP00000039187 N 0.000
ENSMPUG00000017495 Mustela putorius furo ENSMPUG00000017495 N 0.000
ENSOARG00000020232 Ovis aries ENSOARG00000020232 I 0.000
ENSSTOG00000020113 Ictidomys tridecemlineatus ENSSTOG00000020113 N 0.000
ENSTGUG00000007004 Taeniopygia guttata ENSTGUG00000007004 N 0.000
Gfo_R003999 Geospiza fortis Gfo_R003999 N 0.000
Myotis_brandtii_MRF_10004739 Myotis brandtii Myotis_brandtii_MRF_10004739 N 0.000
Myrfl Rattus norvegicus ENSRNOG00000021833 N 0.000
MYRFL Anolis carolinensis ENSACAG00000004738 N 0.000
MYRFL Otolemur garnettii ENSOGAG00000028145 N 0.000
MYRFL Oryctolagus cuniculus ENSOCUG00000002982 N 0.000
MYRFL Bos taurus ENSBTAG00000014829 N 0.000
MYRFL Cavia porcellus ENSCPOG00000013850 N 0.000
MYRFL Dasypus novemcinctus ENSDNOG00000044488 N 0.000
MYRFL Felis catus ENSFCAG00000031998 N 0.000
MYRFL Homo sapiens ENSG00000166268 N 0.000
MYRFL Gallus gallus ENSGALG00000019352 N 0.000
MYRFL Loxodonta africana ENSLAFG00000001286 N 0.000
MYRFL Meleagris gallopavo ENSMGAG00000010606 N 0.000
MYRFL Myotis lucifugus ENSMLUG00000009508 N 0.000
MYRFL Monodelphis domestica ENSMODG00000020385 N 0.000
Myrfl Mus musculus ENSMUSG00000034057 N 0.000
MYRFL Ornithorhynchus anatinus ENSOANG00000005958 N 0.000
Ocbimv22003657m.g Octopus bimaculoides Ocbimv22003657m.g N 0.000
Tal_R011346 Tyto alba Tal_R011346 N 0.000