CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf016403m
(
Mimulus guttatus
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
mgf016403m
T007360_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT5G65130
M06686_2.00
Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR
Dap-seq
OMalley et al.(2016)
At5g65130_col_a
0.686
0.740
AT5G65130
M06687_2.00
Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN
Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a
0.686
0.740
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf016403m
AP2
75
126
KMYRGVRQRQWGKWVAEIRLPQNRVRVWLGTYDTAEAAAYAYDRAAYKLRGE
Links
Other
AP2
family TFs
Other
Mimulus guttatus
TFs
81 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy