mgf019708m (Mimulus guttatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 mgf019708m T007393_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PLT1
M06622_2.00
Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN

NNDYCTYGRDWWNCGTGHH
Dap-seq
OMalley et al.(2016)
PLT1_col_a
0.884 0.865
PLT1
M06623_2.00
Arabidopsis thaliana
DYDCRNWTYYCRAG

CTYGRRAWNYGHRH
Dap-seq
OMalley et al.(2016)
PLT1_colamp_a
0.884 0.865
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.847 0.827
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.847 0.827
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.833 0.808
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.833 0.808
AIL7
M06688_2.00
Arabidopsis thaliana
CRNWTHYCRAG

CTYGRDAWNYG
Dap-seq
OMalley et al.(2016)
AIL7_col_a
0.826 0.837
AIL7
M06689_2.00
Arabidopsis thaliana
DCRNWTHYCRAG

CTYGRDAWNYGH
Dap-seq
OMalley et al.(2016)
AIL7_colamp_a
0.826 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mgf019708m AP2 142 199
mgf019708m AP2 241 293

Links

Other AP2 family TFs
Other Mimulus guttatus TFs

Invalid Input OrderBy

525 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action