Aquca_043_00039 (Aquilegia coerulea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Aquca_043_00039 T007525_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.818 0.880
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.818 0.880
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.775 0.820
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.775 0.820
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.775 0.820
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.775 0.820
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.760 0.900
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN

NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.728 0.820
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH

DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.728 0.820
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD

HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.728 0.820
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.707 0.740
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.701 0.780
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.700 0.740
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN

NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.697 0.740
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD

HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.697 0.740
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN

NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.697 0.740
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.696 0.760
ABR1
M01051_2.00
Arabidopsis thaliana
NYGSCGSCVNN

NNBGSCGSCRN
PBM
Sullivan et al.(2014)
pTH7383
0.694 0.780
ABR1
M06684_2.00
Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH

DDNDRNDDHKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ABR1_col_a
0.694 0.780
ABR1
M06685_2.00
Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN

NNNNNDWTKGCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
ABR1_colamp_a
0.694 0.780
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.685 0.740
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.680 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_043_00039.1 AP2 61 112

Links

Other AP2 family TFs
Other Aquilegia coerulea TFs

611 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006413 Ailuropoda melanoleuca ENSAMEG00000006413 I 0.000
ENSAPLG00000016372 Anas platyrhynchos ENSAPLG00000016372 I 0.000
FOXN2 Anolis carolinensis ENSACAG00000014236 I 0.000
ENSAMXG00000001149 Astyanax mexicanus ENSAMXG00000001149 I 0.000
ENSAMXG00000011599 Astyanax mexicanus ENSAMXG00000011599 I 0.000
ENSP00000394031-D1 Bos grunniens ENSP00000394031-D1 I 0.000
FOXN2 Bos taurus ENSBTAG00000015151 I 0.000
FOXN2 Callithrix jacchus ENSCJAG00000010894 I 0.000
FOXN2 Canis familiaris ENSCAFG00000029603 I 0.000
ENSCPOG00000026162 Cavia porcellus ENSCPOG00000026162 I 0.000
ENSCSAG00000013601 Chlorocebus sabaeus ENSCSAG00000013601 I 0.000
FOXN2 Choloepus hoffmanni ENSCHOG00000000109 I 0.000
foxn2b Danio rerio ENSDARG00000045105 I 0.000
CABZ01056727.1 Danio rerio ENSDARG00000055574 I 0.000
FOXN2 Dasypus novemcinctus ENSDNOG00000035609 I 0.000
Foxn2 Dipodomys ordii ENSDORG00000007020 I 0.000
FOXN2 Echinops telfairi ENSETEG00000007413 I 0.000
FOXN2 Equus caballus ENSECAG00000008390 I 0.000
FOXN2 Erinaceus europaeus ENSEEUG00000015228 I 0.000
FOXN2 Felis catus ENSFCAG00000022828 I 0.000
ENSFALG00000011112 Ficedula albicollis ENSFALG00000011112 I 0.000
ENSGMOG00000016028 Gadus morhua ENSGMOG00000016028 I 0.000
ENSGMOG00000018188 Gadus morhua ENSGMOG00000018188 I 0.000
foxn2b Gasterosteus aculeatus ENSGACG00000005486 I 0.000
FOXN2 Gorilla gorilla ENSGGOG00000008171 I 0.000
FOXN2 Homo sapiens ENSG00000170802 D 0.000
ENSSTOG00000000862 Ictidomys tridecemlineatus ENSSTOG00000000862 I 0.000
ENSLACG00000013808 Latimeria chalumnae ENSLACG00000013808 I 0.000
ENSLOCG00000016292 Lepisosteus oculatus ENSLOCG00000016292 I 0.000
FOXN2 Loxodonta africana ENSLAFG00000012466 I 0.000
ENSP00000343633 Macaca fascicularis ENSP00000343633 I 0.000
FOXN2 Macaca mulatta ENSMMUG00000020677 I 0.000
ENSMEUG00000000214 Macropus eugenii ENSMEUG00000000214 I 0.000
FOXN2 Meleagris gallopavo ENSMGAG00000005062 I 0.000
FOXN2 Monodelphis domestica ENSMODG00000001169 I 0.000
ENSMPUG00000010993 Mustela putorius furo ENSMPUG00000010993 I 0.000
Foxn2 Mus musculus ENSMUSG00000034998 I 0.000
Myotis_brandtii_FOXN2_10033482 Myotis brandtii Myotis_brandtii_FOXN2_10033482 I 0.000
FOXN2 Myotis lucifugus ENSMLUG00000017567 I 0.000
NEMVEDRAFT_v1g67209 Nematostella vectensis NEMVEDRAFT_v1g67209 D 0.000
ENSNLEG00000008649 Nomascus leucogenys ENSNLEG00000008649 I 0.000
FOXN2 Ochotona princeps ENSOPRG00000007661 I 0.000
Ocbimv22027168m.g Octopus bimaculoides Ocbimv22027168m.g I 0.000
Ogr07715 Ophisaurus gracilis Ogr07715 I 0.000
ENSONIG00000001158 Oreochromis niloticus ENSONIG00000001158 I 0.000
ENSONIG00000009856 Oreochromis niloticus ENSONIG00000009856 I 0.000
FOXN2 Oryctolagus cuniculus ENSOCUG00000009784 I 0.000
ches1 Oryzias latipes ENSORLG00000010729 I 0.000
foxn2b Oryzias latipes ENSORLG00000011005 I 0.000
FOXN2 Otolemur garnettii ENSOGAG00000011745 I 0.000
ENSOARG00000004763 Ovis aries ENSOARG00000004763 I 0.000
FOXN2 Pan troglodytes ENSPTRG00000011908 I 0.000
ENSPANG00000013263 Papio anubis ENSPANG00000013263 I 0.000
ENSPFOG00000001305 Poecilia formosa ENSPFOG00000001305 I 0.000
ENSPFOG00000015286 Poecilia formosa ENSPFOG00000015286 I 0.000
Pvit_15105 Pogona vitticeps Pvit_15105 I 0.000
ENSPPYG00000012423 Pongo abelii ENSPPYG00000012423 I 0.000
FOXN2 Procavia capensis ENSPCAG00000005254 I 0.000
FOXN2 Pteropus vampyrus ENSPVAG00000003737 I 0.000
Foxn2 Rattus norvegicus ENSRNOG00000040110 I 0.000
ENSSHAG00000001461 Sarcophilus harrisii ENSSHAG00000001461 I 0.000
FOXN2 Sorex araneus ENSSARG00000003696 I 0.000
FOXN2 Sus scrofa ENSSSCG00000029593 I 0.000
ches1 Takifugu rubripes ENSTRUG00000003497 I 0.000
foxn2b Takifugu rubripes ENSTRUG00000013724 I 0.000
ENSTSYG00000014704 Tarsius syrichta ENSTSYG00000014704 I 0.000
foxn2b Tetraodon nigroviridis ENSTNIG00000016601 I 0.000
ENSTNIG00000009703 Tetraodon nigroviridis ENSTNIG00000009703 I 0.000
FOXN2 Tursiops truncatus ENSTTRG00000003735 I 0.000
FOXN2 Vicugna pacos ENSVPAG00000009218 I 0.000
foxn2.S Xenopus laevis XB-GENE-952923 I 0.000
foxn2 Xenopus tropicalis XB-GENE-952918 I 0.000
ENSXMAG00000001667 Xiphophorus maculatus ENSXMAG00000001667 I 0.000