Bostr.12659s0041 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.12659s0041 T007558_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.799 1.000
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.782 0.960
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.12659s0041.1.p AP2 47 98

Links

Other AP2 family TFs
Other Boechera stricta TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A_02303 Schistosoma haematobium A_02303 I 0.000
CPUR_04901 Claviceps purpurea CPUR_04901 I 0.000
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I 0.000
DILT_0001682001 Diphyllobothrium latum DILT_0001682001 N 0.000
ECPE_0001729301 Echinostoma caproni ECPE_0001729301 N 0.000
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.000
gw1.199.74.1 Physcomitrella patens gw1.199.74.1 I 0.000
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I 0.000
NCU02819 Neurospora crassa NCU02819 D 0.000
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.000
PODANS_1_7390 Podospora anserina PODANS_1_7390 I 0.000
SCUD_0001691501 Schistosoma curassoni SCUD_0001691501 I 0.000
Sjc_0021990 Schistosoma japonicum Sjc_0021990 I 0.000
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.000
SMRZ_0000758001 Schistosoma margrebowiei SMRZ_0000758001 I 0.000
SMTD_0001766201 Schistosoma mattheei SMTD_0001766201 I 0.000
SROB_0001231001 Schistosoma rodhaini SROB_0001231001 I 0.000
THITE_2121767 Thielavia terrestris THITE_2121767 I 0.000
TRE_0001526701 Trichobilharzia regenti TRE_0001526701 N 0.000