Bostr.15774s0348 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.15774s0348 T007582_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF025
M06680_2.00
Arabidopsis thaliana
NNNYYGCCGACANHN

NDNTGTCGGCRRNNN
Dap-seq
OMalley et al.(2016)
Rap210_col_a
0.740 0.959
ERF025
M06681_2.00
Arabidopsis thaliana
NNNYNRCCGACANN

NNTGTCGGYNRNNN
Dap-seq
OMalley et al.(2016)
Rap210_colamp_a
0.740 0.959
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.15774s0348.1.p AP2 67 117

Links

Other AP2 family TFs
Other Boechera stricta TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF7 Arabidopsis thaliana AT3G20310 D 0.000
BRADI3G06562 Brachypodium distachyon BRADI3G06562 I 0.000
Bo3g074840 Brassica oleracea Bo3g074840 I 0.000
Bra001784 Brassica rapa Bra001784 I 0.000
Bra018864 Brassica rapa Bra018864 I 0.000
Cagra.0316s0033 Capsella grandiflora Cagra.0316s0033 I 0.000
Carubv10014475m.g Capsella rubella Carubv10014475m.g I 0.000
Thhalv10021393m.g Eutrema salsugineum Thhalv10021393m.g I 0.000
gene03450-v1.0-hybrid Fragaria vesca gene03450-v1.0-hybrid I 0.000
GLYMA14G02360 Glycine max GLYMA14G02360 I 0.000
GLYMA06G44430 Glycine max GLYMA06G44430 I 0.000
GLYMA12G13315 Glycine max GLYMA12G13315 I 0.000
GLYMA02G46340 Glycine max GLYMA02G46340 I 0.000
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.000
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.000
Gorai.013G169500 Gossypium raimondii Gorai.013G169500 I 0.000
LPERR02G05920 Leersia perrieri LPERR02G05920 I 0.000
Lus10043182.g Linum usitatissimum Lus10043182.g I 0.000
cassava34729.m1 Manihot esculenta cassava34729.m1 I 0.000
GSMUA_Achr3G23710_001 Musa acuminata GSMUA_Achr3G23710_001 I 0.000
GSMUA_Achr3G13010_001 Musa acuminata GSMUA_Achr3G13010_001 I 0.000
ORGLA02G0063000 Oryza glaberrima ORGLA02G0063000 I 0.000
OGLUM02G06860 Oryza glumaepatula OGLUM02G06860 I 0.000
OMERI02G07840 Oryza meridionalis OMERI02G07840 I 0.000
OPUNC02G05940 Oryza punctata OPUNC02G05940 I 0.000
ORUFI02G06880 Oryza rufipogon ORUFI02G06880 I 0.000
Pavir.Ab00660 Panicum virgatum Pavir.Ab00660 I 0.000
Pavir.Aa03102 Panicum virgatum Pavir.Aa03102 I 0.000
Solyc03g005510.1 Solanum lycopersicum Solyc03g005510.1 I 0.000
Solyc07g049490.1 Solanum lycopersicum Solyc07g049490.1 I 0.000
PGSC0003DMG400013450 Solanum tuberosum PGSC0003DMG400013450 I 0.000
PGSC0003DMG400000681 Solanum tuberosum PGSC0003DMG400000681 I 0.000
Sb04g006080 Sorghum bicolor Sb04g006080 I 0.000
GRMZM2G146028 Zea mays GRMZM2G146028 I 0.000
GRMZM2G079653 Zea mays GRMZM2G079653 I 0.000
GRMZM2G020150 Zea mays GRMZM2G020150 I 0.000