Bostr.23794s0149 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.23794s0149 T007602_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SMZ
M08402_2.00
Arabidopsis thaliana
YCTCGTAC

GTACGAGR
ChIP-chip
Mathelier et al.(2014)
MA0553.1
0.801 0.939
TOE2
M00851_2.00
Arabidopsis thaliana
NNNNTACGAGGWN

NWCCTCGTANNNN
PBM
Franco-Zorrilla et al.(2014)
TOE2
0.788 0.898
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.23794s0149.1.p AP2 106 156

Links

Other AP2 family TFs
Other Boechera stricta TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SMZ Arabidopsis thaliana AT3G54990 D 0.801
TOE2 Arabidopsis thaliana AT5G60120 D 0.788
PK16652.1 Cannabis sativa PK16652.1 I 0.787
Carubv10023614m.g Capsella rubella Carubv10023614m.g I 0.860
Carubv10018526m.g Capsella rubella Carubv10018526m.g I 0.801
Cagra.1742s0021 Capsella grandiflora Cagra.1742s0021 I 0.801
Cagra.1317s0005 Capsella grandiflora Cagra.1317s0005 I 0.788
Cagra.0716s0040 Capsella grandiflora Cagra.0716s0040 I 0.860
Bostr.26833s0222 Boechera stricta Bostr.26833s0222 I 0.788
Bostr.0697s0115 Boechera stricta Bostr.0697s0115 I 0.801
Carubv10026292m.g Capsella rubella Carubv10026292m.g I 0.788
Eucgr.G02793 Eucalyptus grandis Eucgr.G02793 I 0.797
gene23316-v1.0-hybrid Fragaria vesca gene23316-v1.0-hybrid I 0.794
Gorai.003G139800 Gossypium raimondii Gorai.003G139800 I 0.787
Gorai.011G241700 Gossypium raimondii Gorai.011G241700 I 0.787
Lus10040365.g Linum usitatissimum Lus10040365.g I 0.786
MDP0000281079 Malus domestica MDP0000281079 I 0.798
MDP0000285955 Malus domestica MDP0000285955 I 0.798
Thhalv10010513m.g Eutrema salsugineum Thhalv10010513m.g I 0.801
Thhalv10013367m.g Eutrema salsugineum Thhalv10013367m.g I 0.788
Cucsa.165940 Cucumis sativus Cucsa.165940 I 0.787
Pm018608 Prunus mume Pm018608 I 0.798
Cla020387 Citrullus lanatus Cla020387 I 0.787
Bo6g068410 Brassica oleracea Bo6g068410 I 0.819
Bo8g087280 Brassica oleracea Bo8g087280 I 0.801
Bo9g141100 Brassica oleracea Bo9g141100 I 0.788
Bra002510 Brassica rapa Bra002510 I 0.788
Bra007123 Brassica rapa Bra007123 I 0.801
Bra020262 Brassica rapa Bra020262 I 0.788
SNZ Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001673 I 0.889
SMZ Arabidopsis lyrata fgenesh2_kg.5__1910__AT3G54990.1 I 0.801
GLYMA02G09600 Glycine max GLYMA02G09600 I 0.781
GLYMA10G22390 Glycine max GLYMA10G22390 I 0.781
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.787
MTR_1g049140 Medicago truncatula MTR_1g049140 I 0.776
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.791
PGSC0003DMG400012038 Solanum tuberosum PGSC0003DMG400012038 I 0.787
PRUPE_ppa018704mg Prunus persica PRUPE_ppa018704mg I 0.798
Sb10g001490 Sorghum bicolor Sb10g001490 I 0.791
Ca_26761 Cicer arietinum Ca_26761 I 0.751
SNZ Arabidopsis thaliana AT2G39250 I 0.889