Bostr.3288s0141 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.3288s0141 T007652_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.827 1.000
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.827 1.000
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.803 0.920
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.803 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.3288s0141.1.p AP2 19 70

Links

Other AP2 family TFs
Other Boechera stricta TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.827
ERF018 Arabidopsis thaliana AT1G74930 D 0.827
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.819
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.819
Bo6g086740 Brassica oleracea Bo6g086740 I 0.819
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.819
Bo6g119120 Brassica oleracea Bo6g119120 I 0.815
Bra031069 Brassica rapa Bra031069 I 0.813
Bo8g102870 Brassica oleracea Bo8g102870 I 0.813
Bra003780 Brassica rapa Bra003780 I 0.811
Bra015882 Brassica rapa Bra015882 I 0.810
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.809
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.808
mgf024162m Mimulus guttatus mgf024162m I 0.807
TCM_037486 Theobroma cacao TCM_037486 I 0.807
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.804
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.803
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.803
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.803
ERF017 Arabidopsis thaliana AT1G19210 D 0.803
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.802
mgf021940m Mimulus guttatus mgf021940m I 0.801
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.801
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.801
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.801
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.800
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.799
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.797
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.797
MDP0000704216 Malus domestica MDP0000704216 I 0.796
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.796
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.796
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.796
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.796
Pm027117 Prunus mume Pm027117 I 0.794
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.794
29739.m003716 Ricinus communis 29739.m003716 I 0.794
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.792
MDP0000649022 Malus domestica MDP0000649022 I 0.790
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.790
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.790
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.789
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.788
Cla007584 Citrullus lanatus Cla007584 I 0.788
Bo8g068370 Brassica oleracea Bo8g068370 I 0.788
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.788
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.788
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.788
Bra016518 Brassica rapa Bra016518 I 0.788
mgf025452m Mimulus guttatus mgf025452m I 0.788
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.787
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.787
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.787
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.787
Ca_09124 Cicer arietinum Ca_09124 I 0.787
TCM_037415 Theobroma cacao TCM_037415 I 0.786
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.785
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.784
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.784
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.783
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.781
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.781
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.779
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.777
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.777
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.777
Bra025719 Brassica rapa Bra025719 I 0.777
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.777
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.774
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.773
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.773
29739.m003647 Ricinus communis 29739.m003647 I 0.769
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.769
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.769
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.767
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.767
Si019636m.g Setaria italica Si019636m.g I 0.767
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.766
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.766
Cla011318 Citrullus lanatus Cla011318 I 0.765
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.765
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.763
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.763
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.763
Ca_01683 Cicer arietinum Ca_01683 I 0.763
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.760
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.758
Bo2g023630 Brassica oleracea Bo2g023630 I 0.756
Ca_19297 Cicer arietinum Ca_19297 I 0.756
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.754
Bra020162 Brassica rapa Bra020162 I 0.753
Ca_19295 Cicer arietinum Ca_19295 I 0.750
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.748
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.748
PK18548.1 Cannabis sativa PK18548.1 I 0.748
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.748
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.745
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.745
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.745
Ca_19296 Cicer arietinum Ca_19296 I 0.745
Bra006599 Brassica rapa Bra006599 I 0.741
Bo3g015600 Brassica oleracea Bo3g015600 I 0.741
Si008104m.g Setaria italica Si008104m.g I 0.740
Bra002377 Brassica rapa Bra002377 I 0.739
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.739
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.739
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.739
Bo9g149820 Brassica oleracea Bo9g149820 I 0.739
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.736
ERF016 Arabidopsis thaliana AT5G21960 I 0.733
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.733
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.732
Cla022291 Citrullus lanatus Cla022291 I 0.732
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.730
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.730
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.729
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.729
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.727
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.726
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.718
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.718
OS02G0781300 Oryza sativa OS02G0781300 I 0.718
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.718
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.718
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.718
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.718
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.718
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.718
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.717
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.707
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.701
OBART06G06190 Oryza barthii OBART06G06190 I 0.691
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.691
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.691
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.691
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.691
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.691
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.691
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.689
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.689
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.689
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.689
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.689
OS08G0454000 Oryza sativa OS08G0454000 I 0.689
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.689
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.689
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.689
OBART08G16950 Oryza barthii OBART08G16950 I 0.689
OB08G24280 Oryza brachyantha OB08G24280 I 0.689
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.689
Si015027m.g Setaria italica Si015027m.g I 0.689
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.684
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.683
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.681
F775_23111 Aegilops tauschii F775_23111 I 0.680
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.678
MTR_7g028925 Medicago truncatula MTR_7g028925 I 0.677