Bostr.7128s0526 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.7128s0526 T007662_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.805 0.980
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.805 0.980
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.779 0.900
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.779 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7128s0526.1.p AP2 10 61

Links

Other AP2 family TFs
Other Boechera stricta TFs

145 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.805
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.805
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.805
ERF017 Arabidopsis thaliana AT1G19210 D 0.805
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.798
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.798
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.798
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.797
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.794
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.794
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.793
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.788
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.787
Bra031069 Brassica rapa Bra031069 I 0.786
Bo8g102870 Brassica oleracea Bo8g102870 I 0.786
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.785
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.785
Bra016518 Brassica rapa Bra016518 I 0.785
Bo8g068370 Brassica oleracea Bo8g068370 I 0.785
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.785
TCM_037415 Theobroma cacao TCM_037415 I 0.784
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.783
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.781
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.779
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.779
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.779
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.779
ERF018 Arabidopsis thaliana AT1G74930 D 0.779
mgf024162m Mimulus guttatus mgf024162m I 0.777
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.776
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.775
mgf021940m Mimulus guttatus mgf021940m I 0.774
TCM_037486 Theobroma cacao TCM_037486 I 0.774
Bo6g119120 Brassica oleracea Bo6g119120 I 0.773
Bra003780 Brassica rapa Bra003780 I 0.772
Bo6g086740 Brassica oleracea Bo6g086740 I 0.771
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.771
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.771
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.771
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.771
MDP0000704216 Malus domestica MDP0000704216 I 0.771
Bra015882 Brassica rapa Bra015882 I 0.771
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.770
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.770
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.769
29739.m003716 Ricinus communis 29739.m003716 I 0.768
Pm027117 Prunus mume Pm027117 I 0.768
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.768
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.768
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.768
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.768
MDP0000649022 Malus domestica MDP0000649022 I 0.766
29739.m003647 Ricinus communis 29739.m003647 I 0.764
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.764
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.764
mgf025452m Mimulus guttatus mgf025452m I 0.763
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.763
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.762
Ca_09124 Cicer arietinum Ca_09124 I 0.762
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.762
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.762
Ca_01683 Cicer arietinum Ca_01683 I 0.761
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.761
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.760
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.760
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.760
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.760
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.760
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.757
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.755
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.754
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.752
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.752
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.752
Bo2g023630 Brassica oleracea Bo2g023630 I 0.752
Bra025719 Brassica rapa Bra025719 I 0.751
Bra020162 Brassica rapa Bra020162 I 0.749
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.746
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.746
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.746
Cla007584 Citrullus lanatus Cla007584 I 0.746
Si019636m.g Setaria italica Si019636m.g I 0.746
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.741
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.740
Cla011318 Citrullus lanatus Cla011318 I 0.740
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.738
Bra006599 Brassica rapa Bra006599 I 0.737
Bo3g015600 Brassica oleracea Bo3g015600 I 0.737
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.736
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.735
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.734
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.734
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.734
Bra002377 Brassica rapa Bra002377 I 0.734
Bo9g149820 Brassica oleracea Bo9g149820 I 0.734
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.732
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.728
ERF016 Arabidopsis thaliana AT5G21960 I 0.728
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.728
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.728
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.727
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.726
PK18548.1 Cannabis sativa PK18548.1 I 0.724
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.724
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.724
Ca_19295 Cicer arietinum Ca_19295 I 0.720
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.718
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.718
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.718
Ca_19297 Cicer arietinum Ca_19297 I 0.716
Ca_19296 Cicer arietinum Ca_19296 I 0.714
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.712
Si008104m.g Setaria italica Si008104m.g I 0.712
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.710
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.706
Cla022291 Citrullus lanatus Cla022291 I 0.704
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.704
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.704
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.704
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.702
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.700
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.700
OS02G0781300 Oryza sativa OS02G0781300 I 0.700
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.700
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.700
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.700
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.700
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.700
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.694
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.686
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.679
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.678
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.678
OBART08G16950 Oryza barthii OBART08G16950 I 0.678
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.678
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.678
OB08G24280 Oryza brachyantha OB08G24280 I 0.678
OS08G0454000 Oryza sativa OS08G0454000 I 0.678
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.678
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.678
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.678
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.678
Si015027m.g Setaria italica Si015027m.g I 0.678
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.678
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.677