Cagra.6748s0006 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.6748s0006 T007800_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-4
M01612_2.00
Arabidopsis thaliana
NRCCGHCMNN

NNKGDCGGYN
PBM
Weirauch et al.(2014)
pTH8092
0.781 0.860
ERF055
M06577_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_col_a
0.768 0.840
ERF055
M06578_2.00
Arabidopsis thaliana
NHDYCACCGHCMHH

DDKGDCGGTGRHDN
Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a
0.768 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.6748s0006.1.p AP2 189 240

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

428 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
13508_YKL043W Saccharomyces mikatae 13508_YKL043W I 0.000
13647_YKL043W Saccharomyces paradoxus 13647_YKL043W I 0.000
14607_YKL043W Saccharomyces bayanus 14607_YKL043W I 0.000
16462_YMR016C Saccharomyces mikatae 16462_YMR016C I 0.000
17269_YMR016C Saccharomyces paradoxus 17269_YMR016C I 0.000
17689_YMR016C Saccharomyces bayanus 17689_YMR016C I 0.000
AACERI_AaceriABR055C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR055C I 0.000
ACRE_033420 Acremonium chrysogenum ACRE_033420 I 0.000
AGOS_ABR055C Ashbya gossypii AGOS_ABR055C I 0.000
AOL_s00083g25 Arthrobotrys oligospora AOL_s00083g25 I 0.000
BDDG_09856 Blastomyces dermatitidis BDDG_09856 I 0.000
BN7_6724 Wickerhamomyces ciferrii BN7_6724 I 0.000
ACLA_079840 Aspergillus clavatus CADACLAG00007685 I 0.000
CADAFLAG00006026 Aspergillus flavus CADAFLAG00006026 I 0.000
AFUA_2G07900 Aspergillus fumigatus CADAFUAG00004724 I 0.000
CADANGAG00004797 Aspergillus niger CADANGAG00004797 I 0.000
CADAORAG00005595 Aspergillus oryzae CADAORAG00005595 I 0.000
ATEG_09634 Aspergillus terreus CADATEAG00005510 I 0.000
NFIA_083590 Neosartorya fischeri CADNFIAG00007975 I 0.000
CAGL0L01771g Candida glabrata CAGL0L01771g I 0.000
CaO19.610 Candida albicans CaO19.610 I 0.000
CaO19.8243 Candida albicans CaO19.8243 I 0.000
CD36_33560 Candida dubliniensis CD36_33560 I 0.000
CFIO01_13346 Colletotrichum fioriniae CFIO01_13346 I 0.000
CGGC5_9424 Colletotrichum gloeosporioides CGGC5_9424 I 0.000
CH063_08806 Colletotrichum higginsianum CH063_08806 I 0.000
CHGG_00576 Chaetomium globosum CHGG_00576 I 0.000
CIMG_00904 Coccidioides immitis CIMG_00904 I 0.000
CLUG_02047 Clavispora lusitaniae CLUG_02047 I 0.000
CLUG_02047 Candida lusitaniae CLUG_02047 I 0.000
Cob_09448 Colletotrichum orbiculare Cob_09448 I 0.000
COCC4DRAFT_44406 Bipolaris maydis COCC4DRAFT_44406 I 0.000
COCCADRAFT_26917 Bipolaris zeicola COCCADRAFT_26917 I 0.000
COCMIDRAFT_103135 Bipolaris oryzae COCMIDRAFT_103135 I 0.000
COCSADRAFT_302496 Bipolaris sorokiniana COCSADRAFT_302496 I 0.000
COCVIDRAFT_16107 Bipolaris victoriae COCVIDRAFT_16107 I 0.000
CORT_0G01760 Candida orthopsilosis CORT_0G01760 I 0.000
CPAG_00178 Candida parapsilosis CPAG_00178 I 0.000
CPC735_054280 Coccidioides posadasii CPC735_054280 I 0.000
CPUR_06267 Claviceps purpurea CPUR_06267 I 0.000
CSUB01_00783 Colletotrichum sublineola CSUB01_00783 I 0.000
CTRG_01780 Candida tropicalis CTRG_01780 N 0.000
DEHA2E10978g Debaryomyces hansenii DEHA2E10978g I 0.000
DRE_03961 Drechslerella stenobrocha DRE_03961 I 0.000
Ecym_4584 Eremothecium cymbalariae Ecym_4584 I 0.000
EPUS_07300 Endocarpon pusillum EPUS_07300 I 0.000
estExt_fgenesh1_pg.C_220129 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_220129 I 0.000
estExt_fgenesh1_pg.C_chr_3.10654 Pichia stipitis estExt_fgenesh1_pg.C_chr_3.10654 I 0.000
estExt_fgenesh2_pg.C_10649 Neurospora discreta estExt_fgenesh2_pg.C_10649 I 0.000
EURHEDRAFT_451308 Aspergillus ruber EURHEDRAFT_451308 I 0.000
EV44_g0662 Erysiphe necator EV44_g0662 I 0.000
e_gw1.5.76.1 Nectria haematococca e_gw1.5.76.1 D 0.000
e_gw1.7.880.1 Cryphonectria parasitica e_gw1.7.880.1 I 0.000
FGRRES_10129 Fusarium graminearum FGRRES_10129 I 0.000
FPSE_02622 Fusarium pseudograminearum FPSE_02622 I 0.000
G210_4810 Candida maltosa G210_4810 I 0.000
GGTG_14065 Gaeumannomyces graminis GGTG_14065 I 0.000
GLRG_04290 Colletotrichum graminicola GLRG_04290 I 0.000
GNLVRS01_PISO0E14370g Millerozyma farinosa GNLVRS01_PISO0E14370g I 0.000
GNLVRS01_PISO0F15757g Millerozyma farinosa GNLVRS01_PISO0F15757g I 0.000
GSTUM_00005509001 Tuber melanosporum GSTUM_00005509001 I 0.000
H072_1771 Dactylellina haptotyla H072_1771 I 0.000
HCAG_07413 Histoplasma capsulatum HCAG_07413 D 0.000
HCBG_04638 Histoplasma capsulatum HCBG_04638 I 0.000
HPODL_01835 Ogataea parapolymorpha HPODL_01835 I 0.000
HPODL_04965 Ogataea parapolymorpha HPODL_04965 I 0.000
JL09_g3139 Pichia kudriavzevii JL09_g3139 I 0.000
KAFR_0A02120 Kazachstania africana KAFR_0A02120 I 0.000
KAFR_0B01410 Kazachstania africana KAFR_0B01410 I 0.000
KLLA0_F04840g Kluyveromyces lactis KLLA0_F04840g I 0.000
KLTH0D07876g Lachancea thermotolerans KLTH0D07876g I 0.000
KLTH0D07876g Kluyveromyces thermotolerans KLTH0D07876g I 0.000
KUCA_T00004103001 Kuraishia capsulata KUCA_T00004103001 I 0.000
Kwal_8176 Kluyveromyces waltii Kwal_8176 I 0.000
LALA0_S02e00628g Lachancea lanzarotensis LALA0_S02e00628g I 0.000
LELG_05390 Lodderomyces elongisporus LELG_05390 I 0.000
LEMA_P011910.1 Leptosphaeria maculans LEMA_P011910.1 I 0.000
MAJ_05255 Metarhizium majus MAJ_05255 I 0.000
MAM_05111 Metarhizium album MAM_05111 I 0.000
MANI_024223 Metarhizium anisopliae MANI_024223 I 0.000
MAPG_07556 Magnaporthe poae MAPG_07556 I 0.000
MBR_04259 Metarhizium brunneum MBR_04259 I 0.000
MGU_05003 Metarhizium guizhouense MGU_05003 I 0.000
MYCTH_93313 Myceliophthora thermophila MYCTH_93313 I 0.000
NCAS_0A04710 Naumovozyma castellii NCAS_0A04710 I 0.000
Asm-1 Neurospora crassa NCU01414 I 0.000
NechaG41703 Fusarium solani NechaG41703 I 0.000
NEUTE1DRAFT_115825 Neurospora tetrasperma NEUTE1DRAFT_115825 I 0.000
OCS_03868 Ophiocordyceps sinensis OCS_03868 I 0.000
PAS_chr1-4_0530 Komagataella pastoris PAS_chr1-4_0530 I 0.000
PFICI_06302 Pestalotiopsis fici PFICI_06302 I 0.000
PGUG_03651 Candida guilliermondii PGUG_03651 I 0.000
PICST_67427 Scheffersomyces stipitis PICST_67427 I 0.000
PMAA_070290 Penicillium marneffei PMAA_070290 I 0.000
PMAA_070290 Talaromyces marneffei PMAA_070290 I 0.000
PODANS_2_890 Podospora anserina PODANS_2_890 I 0.000
PTRG_01883 Pyrenophora triticirepentis PTRG_01883 I 0.000
PTT_19958 Pyrenophora teres PTT_19958 I 0.000
PV09_05716 Verruconis gallopava PV09_05716 I 0.000
SAKL0D13442g Lachancea kluyveri SAKL0D13442g I 0.000
SAPIO_CDS10609 Scedosporium apiospermum SAPIO_CDS10609 I 0.000
Scas_Contig625.8 Saccharomyces castellii Scas_Contig625.8 I 0.000
SETTUDRAFT_91357 Setosphaeria turcica SETTUDRAFT_91357 I 0.000
SKUD_205409 Saccharomyces kudriavzevii SKUD_205409 I 0.000
SKUD_205603 Saccharomyces kudriavzevii SKUD_205603 I 0.000
SMAC_08389 Sordaria macrospora SMAC_08389 I 0.000
SNOG_14941 Stagonospora nodorum SNOG_14941 I 0.000
SNOG_14941 Phaeosphaeria nodorum SNOG_14941 I 0.000
SPAPADRAFT_59209 Spathaspora passalidarum SPAPADRAFT_59209 I 0.000
SU7_2504 Saccharomyces arboricola SU7_2504 I 0.000
TDEL_0B06530 Torulaspora delbrueckii TDEL_0B06530 I 0.000
TRIATDRAFT_163709 Trichoderma atroviride TRIATDRAFT_163709 I 0.000
TRIREDRAFT_74531 Trichoderma reesei TRIREDRAFT_74531 I 0.000
TRIVIDRAFT_133620 Trichoderma virens TRIVIDRAFT_133620 I 0.000
TSTA_090620 Talaromyces stipitatus TSTA_090620 I 0.000
UCRPA7_4586 Togninia minima UCRPA7_4586 I 0.000
UV8b_6148 Ustilaginoidea virens UV8b_6148 I 0.000
VHEMI10191 Torrubiella hemipterigena VHEMI10191 I 0.000
W97_03035 Coniosporium apollinis W97_03035 I 0.000
XP_002490663.1 Pichia pastoris XP_002490663.1 I 0.000
YALI0_B19602g Yarrowia lipolytica YALI0_B19602g I 0.000
YALI0_D01573g Yarrowia lipolytica YALI0_D01573g I 0.000
PHD1 Saccharomyces cerevisiae YKL043W D 0.000
SOK2 Saccharomyces cerevisiae YMR016C D 0.000
ZBAI_03487 Zygosaccharomyces bailii ZBAI_03487 I 0.000
ZBAI_08486 Zygosaccharomyces bailii ZBAI_08486 I 0.000
ZYRO0E06248g Zygosaccharomyces rouxii ZYRO0E06248g I 0.000