TF Information

Carubv10017705m.g *(Capsella rubella)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00847 (AP2)	IPR001471	Carubv10017705m.g	T007890_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK24580.1 M01101_2.00	Cannabis sativa	VGCCGGCM	KGCCGGCB	PBM Lambert et al.(2019) pTH11280	0.686	0.580
ERF118 M01047_2.00	Arabidopsis thaliana	NCGCCGYNN	NNRCGGCGN	PBM Sullivan et al.(2014) pTH7330	0.686	0.620
ERF118 M06591_2.00	Arabidopsis thaliana	YHDYCKCCGCCGYHD	HDRCGGCGGMGRHDR	Dap-seq OMalley et al.(2016) CRF10_col100_a	0.686	0.620
ERF118 M06592_2.00	Arabidopsis thaliana	NGDATCHNDGATTCNNH	DNNGAATCHNDGATHCN	Dap-seq OMalley et al.(2016) CRF10_colamp_a	0.686	0.620
CRF4 M01626_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8261	0.681	0.760
CRF4 M06645_2.00	Arabidopsis thaliana	BMDCCGCCGCCRCHDHHDCYN	NRGHDDHDGYGGCGGCGGHKV	Dap-seq OMalley et al.(2016) CRF4_col_a	0.681	0.760
CRF4 M06646_2.00	Arabidopsis thaliana	YCDYCGCCGCCGYYD	HRRCGGCGGCGRHGR	Dap-seq OMalley et al.(2016) CRF4_colamp_a	0.681	0.760
CRF2 M01622_2.00	Arabidopsis thaliana	SCGCCGCC	GGCGGCGS	PBM Weirauch et al.(2014) pTH8680	0.678	0.740
For this family, TFs with SR scores > 0.677* will likely have a similar motif*