Carubv10024477m.g (Capsella rubella)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Carubv10024477m.g T007921_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2E
M06609_2.00
Arabidopsis thaliana
NNNHNHMACCGMCWTWD

HWAWGKCGGTKDNDNNN
Dap-seq
OMalley et al.(2016)
DREB19_col_a
0.821 0.962
DREB2E
M06610_2.00
Arabidopsis thaliana
HNHMACCGACWTWD

HWAWGTCGGTKDND
Dap-seq
OMalley et al.(2016)
DREB19_colamp_a
0.821 0.962
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10024477m AP2 72 131

Links

Other AP2 family TFs
Other Capsella rubella TFs

Invalid Input OrderBy

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action