Carubv10025387m.g (Capsella rubella)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Carubv10025387m.g T007926_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.861 1.000
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.837 0.949
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.823 0.939
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.791 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10025387m AP2 158 207
Carubv10025387m AP2 250 301

Links

Other AP2 family TFs
Other Capsella rubella TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VDBG_00583 Verticillium albo atrum VDBG_00583 N 0.000
VDBG_00583 Verticillium alfalfae VDBG_00583 N 0.000
OIDMADRAFT_117508 Oidiodendron maius OIDMADRAFT_117508 N 0.000
MGG_07215 Magnaporthe oryzae MGG_07215 N 0.000
MAPG_07450 Magnaporthe poae MAPG_07450 N 0.000
GMDG_07865 Pseudogymnoascus destructans GMDG_07865 N 0.000
GLRG_04200 Colletotrichum graminicola GLRG_04200 N 0.000
GGTG_00416 Gaeumannomyces graminis GGTG_00416 N 0.000
CSUB01_07056 Colletotrichum sublineola CSUB01_07056 N 0.000
CGGC5_1601 Colletotrichum gloeosporioides CGGC5_1601 N 0.000
CFIO01_08919 Colletotrichum fioriniae CFIO01_08919 N 0.000
Bcin02g08760 Botrytis cinerea Bcin02g08760 N 0.000
e_gw1.7.34.1 Cryphonectria parasitica e_gw1.7.34.1 N 0.000