CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10011588m.g
(
Citrus clementina
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Ciclev10011588m.g
T007991_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.784
0.838
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.770
0.818
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.768
0.828
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.754
0.778
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10011588m
AP2
153
202
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTALAAARAYDRAAIKFRG
Ciclev10011588m
AP2
246
297
SKYRGVTLHKCGRWEARMGQYLGRKYVYLGLYNSEEEAARAYDRAVLKCIGR
Ciclev10011591m
AP2
153
202
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTALAAARAYDRAAIKFRG
Ciclev10011591m
AP2
246
297
SKYRGVTLHKCGRWEARMGQYLGRKYVYLGLYNSEEEAARAYDRAVLKCIGR
Links
Other
AP2
family TFs
Other
Citrus clementina
TFs
237 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy