Ciclev10021132m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10021132m.g T008012_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.729 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10021132m AP2 197 249

Links

Other AP2 family TFs
Other Citrus clementina TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MDP0000133485 Malus domestica MDP0000133485 I 0.774
MDP0000189033 Malus domestica MDP0000189033 I 0.774
MDP0000907929 Malus domestica MDP0000907929 I 0.774
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.759
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.759
MDP0000153445 Malus domestica MDP0000153445 I 0.756
MDP0000317950 Malus domestica MDP0000317950 I 0.756
Gorai.004G070600 Gossypium raimondii Gorai.004G070600 I 0.733
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I 0.732
Gorai.004G070500 Gossypium raimondii Gorai.004G070500 I 0.732
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.729
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.705
Pm017696 Prunus mume Pm017696 I 0.704
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.704
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.701
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.700
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.700
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.699
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.699
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.699
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.698
TCM_005706 Theobroma cacao TCM_005706 I 0.697
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.692
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.691
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.691
TCM_005707 Theobroma cacao TCM_005707 I 0.690
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.689
Pm017699 Prunus mume Pm017699 I 0.688
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.687
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.678
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.677
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.677