Ciclev10033673m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10033673m.g T008076_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10033673m AP2 71 128
Ciclev10033673m AP2 170 221

Links

Other AP2 family TFs
Other Citrus clementina TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29822.m003477 Ricinus communis 29822.m003477 N 0.859
30069.m000440 Ricinus communis 30069.m000440 N 0.791
30114.m000507 Ricinus communis 30114.m000507 N 0.771
ADAP Arabidopsis thaliana AT1G16060 I 0.771
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.777
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.775
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.778
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.864
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.785
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.762
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.770
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.817
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.780
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.732
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.787
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.782
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.778
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.772
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.772
Bo5g021520 Brassica oleracea Bo5g021520 N 0.777
Bo6g067950 Brassica oleracea Bo6g067950 I 0.767
Bo6g124080 Brassica oleracea Bo6g124080 N 0.793
Bo8g083590 Brassica oleracea Bo8g083590 I 0.766
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.765
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.788
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.777
Bra003178 Brassica rapa Bra003178 N 0.792
Bra007066 Brassica rapa Bra007066 N 0.791
Bra026082 Brassica rapa Bra026082 I 0.771
Bra035137 Brassica rapa Bra035137 I 0.790
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.778
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.791
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.781
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.782
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.725
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.765
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.773
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.739
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.768
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.765
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.785
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.851
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.797
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.817
Ca_03306 Cicer arietinum Ca_03306 N 0.769
Ca_10533 Cicer arietinum Ca_10533 N 0.856
Ca_17532 Cicer arietinum Ca_17532 N 0.799
Ca_20689 Cicer arietinum Ca_20689 N 0.845
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.848
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.854
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.776
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.788
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.776
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.798
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.767
Cla015555 Citrullus lanatus Cla015555 N 0.777
Cla017294 Citrullus lanatus Cla017294 N 0.764
Cla019044 Citrullus lanatus Cla019044 N 0.780
Cla020765 Citrullus lanatus Cla020765 N 0.779
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.773
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.774
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.751
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.787
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.776
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.772
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.780
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.729
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.798
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.834
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.836
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.771
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.797
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.724
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.779
F775_02064 Aegilops tauschii F775_02064 N 0.729
F775_02400 Aegilops tauschii F775_02400 I 0.778
F775_06373 Aegilops tauschii F775_06373 N 0.745
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.786
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.797
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.814
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.779
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.776
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.764
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.776
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.776
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.775
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.799
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.816
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.784
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.812
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.813
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.764
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.787
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.809
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.838
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.827
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.880
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.787
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.825
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.763
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.816
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.771
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.757
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.787
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.767
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.810
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.780
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.785
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.761
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.782
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.696
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.781
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.731
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.687
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.767
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.806
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.785
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.763
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.776
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.803
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.768
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.819
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.773
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.764
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.803
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.825
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.815
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.815
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.772
MDP0000133423 Malus domestica MDP0000133423 N 0.776
MDP0000166059 Malus domestica MDP0000166059 N 0.702
MDP0000186581 Malus domestica MDP0000186581 N 0.825
MDP0000206674 Malus domestica MDP0000206674 N 0.800
MDP0000231748 Malus domestica MDP0000231748 N 0.779
MDP0000281784 Malus domestica MDP0000281784 I 0.833
MDP0000297698 Malus domestica MDP0000297698 N 0.825
MDP0000318457 Malus domestica MDP0000318457 N 0.776
mg013664m Mimulus guttatus mg013664m N 0.829
mgf008907m Mimulus guttatus mgf008907m I 0.755
mgf017413m Mimulus guttatus mgf017413m N 0.749
mgf019116m Mimulus guttatus mgf019116m N 0.743
mgf019814m Mimulus guttatus mgf019814m N 0.830
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.776
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.801
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.763
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.854
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.868
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.809
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.793
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.869
OB01G43640 Oryza brachyantha OB01G43640 N 0.678
OB05G31600 Oryza brachyantha OB05G31600 I 0.740
OB09G17420 Oryza brachyantha OB09G17420 I 0.778
OB11G11380 Oryza brachyantha OB11G11380 I 0.727
OB12G11690 Oryza brachyantha OB12G11690 I 0.727
OBART06G03040 Oryza barthii OBART06G03040 N 0.787
OBART09G10730 Oryza barthii OBART09G10730 N 0.781
OBART12G01740 Oryza barthii OBART12G01740 N 0.759
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.806
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.781
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.696
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.785
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.732
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.767
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.754
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.806
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.781
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.772
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.772
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.772
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.787
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.806
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.778
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.772
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.732
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.803
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.767
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.772
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.772
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.767
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.788
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.798
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.892
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.787
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.782
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.778
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.727
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.772
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.787
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.806
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.781
OS05G0536250 Oryza sativa OS05G0536250 I 0.732
OS06G0145700 Oryza sativa OS06G0145700 N 0.765
OS08G0442400 Oryza sativa OS08G0442400 I 0.782
OS09G0423800 Oryza sativa OS09G0423800 I 0.778
OS12G0126300 Oryza sativa OS12G0126300 I 0.727
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.778
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.767
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.691
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.787
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.767
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.691
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.768
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.814
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.747
PK04008.1 Cannabis sativa PK04008.1 I 0.763
PK24809.1 Cannabis sativa PK24809.1 I 0.820
PK26651.1 Cannabis sativa PK26651.1 I 0.765
Pm006561 Prunus mume Pm006561 N 0.898
Pm008629 Prunus mume Pm008629 I 0.771
Pm013856 Prunus mume Pm013856 N 0.780
Pm015843 Prunus mume Pm015843 N 0.821
Pm015847 Prunus mume Pm015847 N 0.868
Pm017032 Prunus mume Pm017032 N 0.791
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.771
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.738
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.728
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.888
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.741
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.859
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.776
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.780
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.898
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.868
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.771
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.859
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.724
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.722
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.771
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.771
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.771
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.778
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.678
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.788
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.786
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.767
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.787
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.698
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.789
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.773
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.799
Si007857m.g Setaria italica Si007857m.g N 0.790
Si012026m.g Setaria italica Si012026m.g N 0.808
Si013842m.g Setaria italica Si013842m.g N 0.781
Si022186m.g Setaria italica Si022186m.g I 0.767
Si026433m.g Setaria italica Si026433m.g N 0.808
Si030129m.g Setaria italica Si030129m.g I 0.776
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.720
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.772
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.812
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.753
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.770
TCM_011797 Theobroma cacao TCM_011797 N 0.890
TCM_018386 Theobroma cacao TCM_018386 N 0.793
TCM_027569 Theobroma cacao TCM_027569 I 0.772
TCM_038442 Theobroma cacao TCM_038442 N 0.776
TCM_044588 Theobroma cacao TCM_044588 I 0.762
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.770
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.791
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.746
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.735
Traes_2BL_569371098 Triticum aestivum Traes_2BL_569371098 I 0.679
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.765
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.728
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.783
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.728
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.790
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.778
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.687
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.756
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.852
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.771
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.801
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.857
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.791
WRI1 Arabidopsis thaliana AT3G54320 I 0.765
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.715