Eucgr.A02822 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02822 T008100_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.722 0.900
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.722 0.900
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.690 0.860
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.690 0.860
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.690 0.860
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.690 0.860
Q8S2T3_BRANA
M09745_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF16_01
0.684 0.880
Q6T3U0_BRANA
M09743_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBII1_01
0.684 0.880
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.683 0.820
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.683 0.820
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.683 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02822.1 AP2 65 116

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

95 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.828
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.828
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.828
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.828
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.826
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.826
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.825
mgf016974m Mimulus guttatus mgf016974m I 0.822
mgf022408m Mimulus guttatus mgf022408m I 0.822
mgf018631m Mimulus guttatus mgf018631m I 0.822
mgf018934m Mimulus guttatus mgf018934m I 0.822
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.822
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.802
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.787
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.785
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.778
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.778
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.778
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.772
Ca_04504 Cicer arietinum Ca_04504 I 0.754
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.752
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.748
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.745
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.741
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.725
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.725
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.725
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.725
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.722
Bo9g104770 Brassica oleracea Bo9g104770 I 0.722
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.722
DREB1D Arabidopsis thaliana AT5G51990 D 0.722
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.722
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.722
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.722
Bra028290 Brassica rapa Bra028290 I 0.722
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.719
mgf026642m Mimulus guttatus mgf026642m I 0.719
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.718
Lus10019455.g Linum usitatissimum Lus10019455.g I 0.718
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.717
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.717
Bo8g050800 Brassica oleracea Bo8g050800 I 0.715
Cla006315 Citrullus lanatus Cla006315 I 0.715
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.715
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.715
Bra010460 Brassica rapa Bra010460 I 0.715
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.713
PK23332.1 Cannabis sativa PK23332.1 I 0.712
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.712
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.712
Pm023777 Prunus mume Pm023777 N 0.711
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.711
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.710
Cla002362 Citrullus lanatus Cla002362 I 0.709
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.708
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.707
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.703
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.703
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.700
30147.m014313 Ricinus communis 30147.m014313 I 0.699
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.699
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.699
Ca_02407 Cicer arietinum Ca_02407 N 0.698
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.697
DREB1A Arabidopsis thaliana AT4G25480 D 0.690
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.690
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.690
Ca_03665 Cicer arietinum Ca_03665 N 0.690
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.689
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.689
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.689
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.689
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.688
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.686
mgf017477m Mimulus guttatus mgf017477m N 0.686
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.685
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.685
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.685
mgf017136m Mimulus guttatus mgf017136m I 0.684
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.684
Ca_18948 Cicer arietinum Ca_18948 I 0.684
Bra019162 Brassica rapa Bra019162 I 0.684
Bo7g110320 Brassica oleracea Bo7g110320 I 0.684
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.684
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.683
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.683
DREB1C Arabidopsis thaliana AT4G25470 D 0.683
30190.m011120 Ricinus communis 30190.m011120 I 0.682
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.681
Bra022770 Brassica rapa Bra022770 I 0.681
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.680
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.678
MDP0000198054 Malus domestica MDP0000198054 I 0.678
Cla011674 Citrullus lanatus Cla011674 I 0.677