Eucgr.A02830 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02830 T008106_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.685 0.840
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.685 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02830.1 AP2 60 111

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.791
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.791
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.791
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.791
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.787
mgf018631m Mimulus guttatus mgf018631m I 0.785
mgf022408m Mimulus guttatus mgf022408m I 0.785
mgf016974m Mimulus guttatus mgf016974m I 0.785
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.785
mgf018934m Mimulus guttatus mgf018934m I 0.785
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.781
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.781
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.780
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.757
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.748
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.741
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.741
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.741
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.735
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.716
Ca_04504 Cicer arietinum Ca_04504 I 0.714
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.712
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.709
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.704
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.698
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.697
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.694
Pm023777 Prunus mume Pm023777 N 0.691
Lus10019455.g Linum usitatissimum Lus10019455.g I 0.691
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.691
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.688
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.688
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.688
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.688
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.688
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.685
Bra028290 Brassica rapa Bra028290 I 0.685
Bo9g104770 Brassica oleracea Bo9g104770 I 0.685
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.685
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.685
DREB1D Arabidopsis thaliana AT5G51990 D 0.685
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.685
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.685
Ca_02407 Cicer arietinum Ca_02407 N 0.683
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.682
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.682
mgf026642m Mimulus guttatus mgf026642m I 0.682
TCM_016175 Theobroma cacao TCM_016175 I 0.682
Ca_03665 Cicer arietinum Ca_03665 N 0.681
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.681
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.679
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.679
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.679
Bo8g050800 Brassica oleracea Bo8g050800 I 0.678
Bra010460 Brassica rapa Bra010460 I 0.678