Eucgr.A02834 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02834 T008109_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB1D
M06678_2.00
Arabidopsis thaliana
NHBRCCGACRTNN

NNAYGTCGGYVDN
Dap-seq
OMalley et al.(2016)
CBF4_col_a
0.716 0.880
DREB1D
M06679_2.00
Arabidopsis thaliana
HYRCCGACATND

HNATGTCGGYRD
Dap-seq
OMalley et al.(2016)
CBF4_colamp_a
0.716 0.880
DREB1A
M01624_2.00
Arabidopsis thaliana
NRCCGACNNN

NNNGTCGGYN
PBM
Weirauch et al.(2014)
pTH8163
0.684 0.840
DREB1A
M01625_2.00
Arabidopsis thaliana
NNRCCGACNW

WNGTCGGYNN
PBM
Weirauch et al.(2014)
pTH9718
0.684 0.840
DREB1A
M06641_2.00
Arabidopsis thaliana
HNYBRCCGACDWNN

NNWHGTCGGYVRND
Dap-seq
OMalley et al.(2016)
CBF3_col_a
0.684 0.840
DREB1A
M06642_2.00
Arabidopsis thaliana
YBRCCGACATN

NATGTCGGYVR
Dap-seq
OMalley et al.(2016)
CBF3_colamp_a
0.684 0.840
Q8S2T3_BRANA
M09745_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBF16_01
0.678 0.860
Q6T3U0_BRANA
M09743_2.00
Brassica napus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREBII1_01
0.678 0.860
DREB1C
M01623_2.00
Arabidopsis thaliana
RCCGACAT

ATGTCGGY
PBM
Weirauch et al.(2014)
pTH8187
0.677 0.800
DREB1C
M06639_2.00
Arabidopsis thaliana
NNNHBRCCGACATNN

NNATGTCGGYVDNNN
Dap-seq
OMalley et al.(2016)
CBF2_col_a
0.677 0.800
DREB1C
M06640_2.00
Arabidopsis thaliana
NYBRCCGACATVN

NBATGTCGGYVRN
Dap-seq
OMalley et al.(2016)
CBF2_colamp_a
0.677 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02834.1 AP2 64 115

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011488 Calypte anna Aan_R011488 I 0.000
Afo_R004723 Aptenodytes forsteri Afo_R004723 I 0.000
Alligator_sinensis_CCG014115.1 Alligator sinensis Alligator_sinensis_CCG014115.1 I 0.000
Brh_R001903 Buceros rhinoceros Brh_R001903 I 0.000
Brh_R009461 Buceros rhinoceros Brh_R009461 I 0.000
Cmyd_10014540 Chelonia mydas Cmyd_10014540 I 0.000
ENSAMEG00000015776 Ailuropoda melanoleuca ENSAMEG00000015776 I 0.000
ENSAMXG00000014376 Astyanax mexicanus ENSAMXG00000014376 I 0.000
ENSAPLG00000010950 Anas platyrhynchos ENSAPLG00000010950 I 0.000
PROX1 Bos taurus ENSBTAG00000010978 I 0.000
ENSBTAP00000014573-D1 Bos grunniens ENSBTAP00000014573-D1 I 0.000
PROX1 Canis familiaris ENSCAFG00000012445 I 0.000
PROX1 Callithrix jacchus ENSCJAG00000015514 I 0.000
PROX1 Cavia porcellus ENSCPOG00000011987 I 0.000
PROX1 Equus caballus ENSECAG00000019220 I 0.000
ENSFALG00000006312 Ficedula albicollis ENSFALG00000006312 I 0.000
ENSFALG00000012357 Ficedula albicollis ENSFALG00000012357 I 0.000
PROX1 Felis catus ENSFCAG00000029702 I 0.000
PROX1 Homo sapiens ENSG00000117707 D 0.000
prox2 Gasterosteus aculeatus ENSGACG00000007538 I 0.000
ENSGACG00000010545 Gasterosteus aculeatus ENSGACG00000010545 I 0.000
PROX1 Gallus gallus ENSGALG00000009791 I 0.000
ENSGALG00000023113 Gallus gallus ENSGALG00000023113 N 0.000
PROX1 Gorilla gorilla ENSGGOG00000015130 I 0.000
ENSGMOG00000001679 Gadus morhua ENSGMOG00000001679 I 0.000
ENSGMOG00000009022 Gadus morhua ENSGMOG00000009022 I 0.000
ENSGMOG00000011081 Gadus morhua ENSGMOG00000011081 I 0.000
ENSGMOG00000015166 Gadus morhua ENSGMOG00000015166 I 0.000
ENSLOCG00000010701 Lepisosteus oculatus ENSLOCG00000010701 I 0.000
PROX1 Meleagris gallopavo ENSMGAG00000009635 I 0.000
PROX2 Meleagris gallopavo ENSMGAG00000012715 N 0.000
PROX1 Myotis lucifugus ENSMLUG00000006993 I 0.000
PROX1 Macaca mulatta ENSMMUG00000011914 I 0.000
ENSMPUG00000013456 Mustela putorius furo ENSMPUG00000013456 I 0.000
Prox1 Mus musculus ENSMUSG00000010175 I 0.000
ENSNLEG00000014435 Nomascus leucogenys ENSNLEG00000014435 I 0.000
ENSOARG00000009324 Ovis aries ENSOARG00000009324 I 0.000
PROX1 Otolemur garnettii ENSOGAG00000017025 I 0.000
ENSONIG00000013518 Oreochromis niloticus ENSONIG00000013518 I 0.000
ENSONIG00000015279 Oreochromis niloticus ENSONIG00000015279 I 0.000
ENSONIG00000020193 Oreochromis niloticus ENSONIG00000020193 I 0.000
ENSORLG00000001996 Oryzias latipes ENSORLG00000001996 I 0.000
prox1a Oryzias latipes ENSORLG00000014947 I 0.000
ENSP00000355925 Macaca fascicularis ENSP00000355925 I 0.000
ENSPANG00000017714 Papio anubis ENSPANG00000017714 I 0.000
ENSPFOG00000003774 Poecilia formosa ENSPFOG00000003774 I 0.000
ENSPFOG00000015503 Poecilia formosa ENSPFOG00000015503 I 0.000
ENSPFOG00000024079 Poecilia formosa ENSPFOG00000024079 N 0.000
ENSPPYG00000000224 Pongo abelii ENSPPYG00000000224 I 0.000
ENSPSIG00000008098 Pelodiscus sinensis ENSPSIG00000008098 I 0.000
PROX1 Pan troglodytes ENSPTRG00000001974 I 0.000
Prox1 Rattus norvegicus ENSRNOG00000003694 I 0.000
PROX1 Sus scrofa ENSSSCG00000015584 I 0.000
PROX1 Taeniopygia guttata ENSTGUG00000002974 I 0.000
ENSTGUG00000012170 Taeniopygia guttata ENSTGUG00000012170 I 0.000
prox2 Tetraodon nigroviridis ENSTNIG00000017414 I 0.000
ENSTRUG00000010061 Takifugu rubripes ENSTRUG00000010061 I 0.000
ENSTRUG00000012738 Takifugu rubripes ENSTRUG00000012738 I 0.000
prox2 Takifugu rubripes ENSTRUG00000018353 I 0.000
ENSXMAG00000003709 Xiphophorus maculatus ENSXMAG00000003709 I 0.000
ENSXMAG00000004000 Xiphophorus maculatus ENSXMAG00000004000 I 0.000
Gfo_R010932 Geospiza fortis Gfo_R010932 I 0.000
Ogr11789 Ophisaurus gracilis Ogr11789 I 0.000
Pvit_00353 Pogona vitticeps Pvit_00353 I 0.000
Tal_R002989 Tyto alba Tal_R002989 I 0.000