Eucgr.B01541 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.B01541 T008115_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.765 0.857
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.712 0.776
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.712 0.776
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.712 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B01541.1 AP2 14 66

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm020605 Prunus mume Pm020605 I 0.796
PRUPE_ppa020642mg Prunus persica PRUPE_ppa020642mg I 0.796
gene08075-v1.0-hybrid Fragaria vesca gene08075-v1.0-hybrid I 0.795
VIT_07s0005g03220 Vitis vinifera VIT_07s0005g03220 I 0.785
cassava41639.m1 Manihot esculenta cassava41639.m1 I 0.781
Cla015065 Citrullus lanatus Cla015065 I 0.778
Cucsa.388540 Cucumis sativus Cucsa.388540 I 0.778
MDP0000286915 Malus domestica MDP0000286915 I 0.777
SapurV1A.0233s0380 Salix purpurea SapurV1A.0233s0380 I 0.775
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.774
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.774
mgf026487m Mimulus guttatus mgf026487m I 0.769
mgf021973m Mimulus guttatus mgf021973m I 0.766
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.765
ERF098 Arabidopsis thaliana AT3G23230 D 0.765
POPTR_0005s24450 Populus trichocarpa POPTR_0005s24450 I 0.765
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.765
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.765
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.755
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.755
TCM_004061 Theobroma cacao TCM_004061 I 0.751
cassava19171.valid.m1 Manihot esculenta cassava19171.valid.m1 I 0.751
29584.m000235 Ricinus communis 29584.m000235 I 0.751
Gorai.001G176700 Gossypium raimondii Gorai.001G176700 I 0.751
Cla021851 Citrullus lanatus Cla021851 I 0.745
Lus10022936.g Linum usitatissimum Lus10022936.g I 0.742
Lus10024883.g Linum usitatissimum Lus10024883.g I 0.742
SapurV1A.0006s0860 Salix purpurea SapurV1A.0006s0860 I 0.738
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.738
MDP0000312701 Malus domestica MDP0000312701 I 0.736
Gorai.001G252900 Gossypium raimondii Gorai.001G252900 I 0.735
Gorai.001G252700 Gossypium raimondii Gorai.001G252700 I 0.735
GLYMA10G00990 Glycine max GLYMA10G00990 I 0.734
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.734
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.733
Bo7g040810 Brassica oleracea Bo7g040810 I 0.732
Bra014925 Brassica rapa Bra014925 I 0.732
Gorai.007G145700 Gossypium raimondii Gorai.007G145700 I 0.730
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.730
GLYMA20G34560 Glycine max GLYMA20G34560 I 0.730
GLYMA10G33070 Glycine max GLYMA10G33070 I 0.730
POPTR_0002s04030 Populus trichocarpa POPTR_0002s04030 I 0.730
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.730
MTR_1g074310 Medicago truncatula MTR_1g074310 I 0.728
Ciclev10023656m.g Citrus clementina Ciclev10023656m.g I 0.727
Ciclev10023546m.g Citrus clementina Ciclev10023546m.g I 0.726
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.725
TRAES3BF046300130CFD_g Triticum aestivum TRAES3BF046300130CFD_g I 0.725
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.723
Bra023748 Brassica rapa Bra023748 I 0.722
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.722
Bo1g102220 Brassica oleracea Bo1g102220 I 0.722
Ca_12080 Cicer arietinum Ca_12080 I 0.719
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.717
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.717
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.716
gene08073-v1.0-hybrid Fragaria vesca gene08073-v1.0-hybrid I 0.716
evm.TU.supercontig_50.28 Carica papaya evm.TU.supercontig_50.28 I 0.715
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.714
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.712
ERF13 Arabidopsis thaliana AT2G44840 D 0.712
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.712
Bo4g024140 Brassica oleracea Bo4g024140 I 0.712
Bra004873 Brassica rapa Bra004873 I 0.712
Bra037630 Brassica rapa Bra037630 I 0.712
Bo4g195220 Brassica oleracea Bo4g195220 I 0.712
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.712
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.712
Bo9g001020 Brassica oleracea Bo9g001020 I 0.710
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.708
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.707
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.706
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.706
Cla021383 Citrullus lanatus Cla021383 I 0.705
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.705
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.705
Ca_06034 Cicer arietinum Ca_06034 I 0.705
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.704
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.704
OMERI03G03710 Oryza meridionalis OMERI03G03710 I 0.704
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.704
TCM_005705 Theobroma cacao TCM_005705 I 0.704
MDP0000830129 Malus domestica MDP0000830129 I 0.703
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.703
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.703
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.702
30174.m008755 Ricinus communis 30174.m008755 I 0.701
ONIVA04G03680 Oryza nivara ONIVA04G03680 I 0.701
OGLUM04G04620 Oryza glumaepatula OGLUM04G04620 I 0.701
OB04G14270 Oryza brachyantha OB04G14270 I 0.701
LPERR04G03550 Leersia perrieri LPERR04G03550 I 0.701
BGIOSGA015474 Oryza indica BGIOSGA015474 I 0.701
OLONG_027600 Oryza longistaminata OLONG_027600 I 0.701
OBART04G05450 Oryza barthii OBART04G05450 I 0.701
OS04G0257500 Oryza sativa OS04G0257500 I 0.701
ORUFI04G06330 Oryza rufipogon ORUFI04G06330 I 0.701
ORGLA04G0041100 Oryza glaberrima ORGLA04G0041100 I 0.701
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.699
Lus10016223.g Linum usitatissimum Lus10016223.g I 0.699
MDP0000930655 Malus domestica MDP0000930655 I 0.699
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.699
Lus10016209.g Linum usitatissimum Lus10016209.g I 0.698
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.698
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.697
Ca_06032 Cicer arietinum Ca_06032 I 0.697
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.697
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.697
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.696
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.696
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.696
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.695
TCM_005706 Theobroma cacao TCM_005706 I 0.694
SELMODRAFT_80895 Selaginella moellendorffii SELMODRAFT_80895 I 0.693
GSMUA_Achr1G15350_001 Musa acuminata GSMUA_Achr1G15350_001 I 0.693
SELMODRAFT_37123 Selaginella moellendorffii SELMODRAFT_37123 I 0.693
cassava41615.m1 Manihot esculenta cassava41615.m1 I 0.692
Lus10029334.g Linum usitatissimum Lus10029334.g I 0.692
Lus10029319.g Linum usitatissimum Lus10029319.g I 0.691
Ciclev10006784m.g Citrus clementina Ciclev10006784m.g I 0.691
orange1.1g048608m.g Citrus sinensis orange1.1g048608m.g I 0.691
Pm003579 Prunus mume Pm003579 I 0.691
PRUPE_ppa016384mg Prunus persica PRUPE_ppa016384mg I 0.691
PGSC0003DMG400010724 Solanum tuberosum PGSC0003DMG400010724 I 0.691
Solyc02g077370.1 Solanum lycopersicum Solyc02g077370.1 I 0.691
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.690
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.690
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.690
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.690
Lus10029333.g Linum usitatissimum Lus10029333.g I 0.690
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.690
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.689
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.689
POPTR_0010s08310 Populus trichocarpa POPTR_0010s08310 I 0.689
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.689
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.689
Pm017696 Prunus mume Pm017696 I 0.689
ONIVA10G10810 Oryza nivara ONIVA10G10810 I 0.688
GLYMA03G26394 Glycine max GLYMA03G26394 I 0.688
OBART10G11630 Oryza barthii OBART10G11630 I 0.688
OGLUM10G11380 Oryza glumaepatula OGLUM10G11380 I 0.688
Cla007696 Citrullus lanatus Cla007696 I 0.688
ORUFI10G12140 Oryza rufipogon ORUFI10G12140 I 0.688
29900.m001559 Ricinus communis 29900.m001559 I 0.688
OPUNC10G09910 Oryza punctata OPUNC10G09910 I 0.688
TCM_004062 Theobroma cacao TCM_004062 I 0.688
ORGLA10G0102500 Oryza glaberrima ORGLA10G0102500 I 0.688
BGIOSGA031822 Oryza indica BGIOSGA031822 I 0.688
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.687
Lus10030261.g Linum usitatissimum Lus10030261.g I 0.687
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.687
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.687
30174.m008756 Ricinus communis 30174.m008756 I 0.687
MTR_4g088005 Medicago truncatula MTR_4g088005 I 0.687
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.687
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.687
Lus10004011.g Linum usitatissimum Lus10004011.g I 0.687
Pm018418 Prunus mume Pm018418 I 0.687
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.686
Eucgr.H03090 Eucalyptus grandis Eucgr.H03090 I 0.686
Pm017699 Prunus mume Pm017699 I 0.686
Ca_07755 Cicer arietinum Ca_07755 I 0.686
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.686
TCM_020870 Theobroma cacao TCM_020870 I 0.686
gene16619-v1.0-hybrid Fragaria vesca gene16619-v1.0-hybrid I 0.685
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I 0.685
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I 0.685
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I 0.685
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.685
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.685
Lus10011830.g Linum usitatissimum Lus10011830.g I 0.684
MTR_8g006840 Medicago truncatula MTR_8g006840 I 0.684
Lus10016225.g Linum usitatissimum Lus10016225.g I 0.684
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I 0.684
mgf021215m Mimulus guttatus mgf021215m I 0.684
mgf001695m Mimulus guttatus mgf001695m I 0.684
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.683
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.683
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.683
OBART03G03890 Oryza barthii OBART03G03890 I 0.683
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.683
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.683
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.683
OS03G0150200 Oryza sativa OS03G0150200 I 0.683
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.683
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.683
Lus10021196.g Linum usitatissimum Lus10021196.g I 0.682
Lus10011831.g Linum usitatissimum Lus10011831.g I 0.682
Cla015064 Citrullus lanatus Cla015064 I 0.682
TCM_005707 Theobroma cacao TCM_005707 I 0.681
Pavir.Ia01823 Panicum virgatum Pavir.Ia01823 I 0.681
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.681
CM1489.90.nc Lotus japonicus CM1489.90.nc I 0.680
GLYMA13G30720 Glycine max GLYMA13G30720 I 0.680
SapurV1A.0007s0960 Salix purpurea SapurV1A.0007s0960 I 0.680
MTR_2g015040 Medicago truncatula MTR_2g015040 I 0.680
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.680
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.680
GLYMA15G08560 Glycine max GLYMA15G08560 I 0.680
Si039759m.g Setaria italica Si039759m.g I 0.680
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.680
TCM_029773 Theobroma cacao TCM_029773 I 0.680
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.680
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.680
cassava38545.m1 Manihot esculenta cassava38545.m1 I 0.680
cassava631.valid.m1 Manihot esculenta cassava631.valid.m1 I 0.680
Ciclev10016995m.g Citrus clementina Ciclev10016995m.g I 0.679
AMTR_s00009p00147970 Amborella trichopoda AMTR_s00009p00147970 I 0.679
Eucgr.B01537 Eucalyptus grandis Eucgr.B01537 I 0.679
Aquca_005_00143 Aquilegia coerulea Aquca_005_00143 I 0.679
Gorai.005G049200 Gossypium raimondii Gorai.005G049200 I 0.679
orange1.1g031071m.g Citrus sinensis orange1.1g031071m.g I 0.679
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.679
TCM_020869 Theobroma cacao TCM_020869 I 0.679
Solyc09g089910.1 Solanum lycopersicum Solyc09g089910.1 I 0.678
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.678
PGSC0003DMG400017233 Solanum tuberosum PGSC0003DMG400017233 I 0.678
GLYMA07G14070 Glycine max GLYMA07G14070 I 0.678
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I 0.678
GLYMA18G48741 Glycine max GLYMA18G48741 I 0.678
Gorai.001G176600 Gossypium raimondii Gorai.001G176600 I 0.678
Gorai.006G249800 Gossypium raimondii Gorai.006G249800 I 0.677
MTR_1g070070 Medicago truncatula MTR_1g070070 I 0.677
cassava38508.m1 Manihot esculenta cassava38508.m1 I 0.677