CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.B02453
(
Eucalyptus grandis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Eucgr.B02453
T008116_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.822
0.939
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.819
0.918
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.804
0.898
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.787
0.816
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.B02453.1
AP2
135
184
SEFRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDRAAIKFRG
Eucgr.B02453.1
AP2
227
278
SKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDGEVEAARAYDKAAIRYNGR
Eucgr.B02453.2
AP2
135
184
SEFRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAQAAARAYDRAAIKFRG
Eucgr.B02453.2
AP2
227
260
SKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIRY
Links
Other
AP2
family TFs
Other
Eucalyptus grandis
TFs
241 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_13s0019g03550
Vitis vinifera
VIT_13s0019g03550
I
0.842
GSMUA_AchrUn_randomG10320_001
Musa acuminata
GSMUA_AchrUn_randomG10320_001
I
0.840
GSMUA_Achr6G33140_001
Musa acuminata
GSMUA_Achr6G33140_001
I
0.838
OB03G45870
Oryza brachyantha
OB03G45870
I
0.835
GSMUA_Achr6G34420_001
Musa acuminata
GSMUA_Achr6G34420_001
I
0.834
GSMUA_Achr8G01980_001
Musa acuminata
GSMUA_Achr8G01980_001
I
0.833
Aquca_010_00628
Aquilegia coerulea
Aquca_010_00628
I
0.833
MLOC_43575
Hordeum vulgare
MLOC_43575
I
0.833
OBART07G08110
Oryza barthii
OBART07G08110
I
0.832
OLONG_021321
Oryza longistaminata
OLONG_021321
I
0.832
OMERI07G06850
Oryza meridionalis
OMERI07G06850
I
0.832
ONIVA03G25220
Oryza nivara
ONIVA03G25220
I
0.832
BGIOSGA025426
Oryza indica
BGIOSGA025426
I
0.832
OS07G0235800
Oryza sativa
OS07G0235800
I
0.832
OPUNC07G07690
Oryza punctata
OPUNC07G07690
I
0.832
ORUFI07G08180
Oryza rufipogon
ORUFI07G08180
I
0.832
ORGLA07G0068600
Oryza glaberrima
ORGLA07G0068600
I
0.832
OGLUM07G07330
Oryza glumaepatula
OGLUM07G07330
I
0.832
BRADI1G53650
Brachypodium distachyon
BRADI1G53650
I
0.831
OGLUM03G38790
Oryza glumaepatula
OGLUM03G38790
I
0.830
ONIVA03G40610
Oryza nivara
ONIVA03G40610
I
0.830
Pavir.J23520
Panicum virgatum
Pavir.J23520
I
0.830
Pavir.J41060
Panicum virgatum
Pavir.J41060
I
0.830
SapurV1A.1340s0010
Salix purpurea
SapurV1A.1340s0010
I
0.830
Sb01g003400
Sorghum bicolor
Sb01g003400
I
0.830
ORUFI03G40640
Oryza rufipogon
ORUFI03G40640
I
0.830
GRMZM5G862109
Zea mays
GRMZM5G862109
I
0.830
OPUNC03G36030
Oryza punctata
OPUNC03G36030
I
0.830
OMERI03G35820
Oryza meridionalis
OMERI03G35820
I
0.830
Si036068m.g
Setaria italica
Si036068m.g
I
0.830
BGIOSGA013826
Oryza indica
BGIOSGA013826
I
0.830
Si029636m.g
Setaria italica
Si029636m.g
I
0.829
GRMZM2G176175
Zea mays
GRMZM2G176175
I
0.829
Sb02g007000
Sorghum bicolor
Sb02g007000
I
0.829
Pavir.Ba03394
Panicum virgatum
Pavir.Ba03394
I
0.829
GSMUA_Achr9G04270_001
Musa acuminata
GSMUA_Achr9G04270_001
I
0.828
RAP2.7
Vitis vinifera
VIT_06s0004g03590
I
0.825
BRADI2G37800
Brachypodium distachyon
BRADI2G37800
I
0.825
F775_32962
Aegilops tauschii
F775_32962
I
0.825
Eucgr.J02113
Eucalyptus grandis
Eucgr.J02113
I
0.825
Traes_1BS_E68807072
Triticum aestivum
Traes_1BS_E68807072
I
0.825
orange1.1g010454m.g
Citrus sinensis
orange1.1g010454m.g
I
0.825
GLYMA13G40470
Glycine max
GLYMA13G40470
I
0.825
Gorai.004G002100
Gossypium raimondii
Gorai.004G002100
I
0.825
Aquca_027_00133
Aquilegia coerulea
Aquca_027_00133
I
0.825
28752.m000339
Ricinus communis
28752.m000339
I
0.825
PGSC0003DMG400025390
Solanum tuberosum
PGSC0003DMG400025390
I
0.825
OS05G0121600
Oryza sativa
OS05G0121600
I
0.825
ORGLA05G0015400
Oryza glaberrima
ORGLA05G0015400
I
0.825
cassava13566.valid.m1
Manihot esculenta
cassava13566.valid.m1
I
0.825
Ca_02499
Cicer arietinum
Ca_02499
I
0.825
OPUNC05G01480
Oryza punctata
OPUNC05G01480
I
0.825
cassava24954.valid.m1
Manihot esculenta
cassava24954.valid.m1
I
0.825
BGIOSGA018911
Oryza indica
BGIOSGA018911
I
0.825
Traes_1DS_2BB06F54C
Triticum aestivum
Traes_1DS_2BB06F54C
I
0.825
Si025305m.g
Setaria italica
Si025305m.g
I
0.825
TCM_042000
Theobroma cacao
TCM_042000
I
0.825
GLYMA12G07800
Glycine max
GLYMA12G07800
I
0.825
chr3.LjT05P05.30.nd
Lotus japonicus
chr3.LjT05P05.30.nd
I
0.825
PDK_20s1506731g001
Phoenix dactylifera
PDK_20s1506731g001
I
0.825
Traes_1AS_90F3120F8
Triticum aestivum
Traes_1AS_90F3120F8
I
0.825
AMTR_s00035p00205430
Amborella trichopoda
AMTR_s00035p00205430
I
0.825
Pavir.J11433
Panicum virgatum
Pavir.J11433
I
0.825
GLYMA11G15650
Glycine max
GLYMA11G15650
I
0.825
Pavir.J23348
Panicum virgatum
Pavir.J23348
I
0.825
SapurV1A.0247s0170
Salix purpurea
SapurV1A.0247s0170
I
0.824
TCM_022077
Theobroma cacao
TCM_022077
I
0.824
VIT_08s0040g03180
Vitis vinifera
VIT_08s0040g03180
I
0.824
GSMUA_Achr9G03060_001
Musa acuminata
GSMUA_Achr9G03060_001
I
0.824
GSMUA_Achr10G03230_001
Musa acuminata
GSMUA_Achr10G03230_001
I
0.824
Aquca_007_00714
Aquilegia coerulea
Aquca_007_00714
I
0.824
Gorai.002G251500
Gossypium raimondii
Gorai.002G251500
I
0.824
POPTR_0016s08530
Populus trichocarpa
POPTR_0016s08530
I
0.824
Pm002492
Prunus mume
Pm002492
I
0.824
PRUPE_ppa005230mg
Prunus persica
PRUPE_ppa005230mg
I
0.824
PGSC0003DMG400027904
Solanum tuberosum
PGSC0003DMG400027904
I
0.824
Solyc10g084340.1
Solanum lycopersicum
Solyc10g084340.1
I
0.824
MDP0000200319
Malus domestica
MDP0000200319
I
0.824
Cucsa.307230
Cucumis sativus
Cucsa.307230
I
0.823
Cla018124
Citrullus lanatus
Cla018124
I
0.823
MTR_4g061200
Medicago truncatula
MTR_4g061200
I
0.823
PK07183.1
Cannabis sativa
PK07183.1
I
0.822
mgf021945m
Mimulus guttatus
mgf021945m
I
0.822
Cucsa.367290
Cucumis sativus
Cucsa.367290
I
0.822
Carubv10025387m.g
Capsella rubella
Carubv10025387m.g
I
0.822
RAP2.7
Arabidopsis thaliana
AT2G28550
D
0.822
Cagra.1809s0003
Capsella grandiflora
Cagra.1809s0003
I
0.822
GLYMA03G33470
Glycine max
GLYMA03G33470
I
0.822
Thhalv10016626m.g
Eutrema salsugineum
Thhalv10016626m.g
I
0.822
LjT39B13.80.nc
Lotus japonicus
LjT39B13.80.nc
I
0.821
MTR_2g093060
Medicago truncatula
MTR_2g093060
I
0.821
Ca_14618
Cicer arietinum
Ca_14618
I
0.821
Pm000974
Prunus mume
Pm000974
I
0.820
Ciclev10028259m.g
Citrus clementina
Ciclev10028259m.g
I
0.820
GRMZM2G700665
Zea mays
GRMZM2G700665
I
0.820
MDP0000181606
Malus domestica
MDP0000181606
I
0.820
29805.m001494
Ricinus communis
29805.m001494
I
0.820
PGSC0003DMG400006482
Solanum tuberosum
PGSC0003DMG400006482
I
0.819
POPTR_0006s13460
Populus trichocarpa
POPTR_0006s13460
I
0.819
Ca_09295
Cicer arietinum
Ca_09295
I
0.819
Bra017809
Brassica rapa
Bra017809
I
0.819
AP2
Arabidopsis thaliana
AT4G36920
I
0.819
AP2
Arabidopsis lyrata
fgenesh2_kg.7__332__AT4G36920.1
I
0.819
MTR_4g094868
Medicago truncatula
MTR_4g094868
I
0.819
GSMUA_Achr4G06100_001
Musa acuminata
GSMUA_Achr4G06100_001
I
0.819
SapurV1A.0209s0320
Salix purpurea
SapurV1A.0209s0320
I
0.819
LjSGA_005424.1
Lotus japonicus
LjSGA_005424.1
I
0.819
GSMUA_Achr1G09830_001
Musa acuminata
GSMUA_Achr1G09830_001
I
0.819
Cagra.4909s0048
Capsella grandiflora
Cagra.4909s0048
I
0.819
Carubv10004818m.g
Capsella rubella
Carubv10004818m.g
I
0.819
Bo7g118400
Brassica oleracea
Bo7g118400
I
0.819
Bo1g004960
Brassica oleracea
Bo1g004960
I
0.819
Q9XHD4_PETHY
Petunia x hybrida
Q9XHD4_PETHY
D
0.819
Bostr.7867s1579
Boechera stricta
Bostr.7867s1579
I
0.819
Bra011741
Brassica rapa
Bra011741
I
0.819
Solyc03g044300.2
Solanum lycopersicum
Solyc03g044300.2
I
0.819
PK02403.1
Cannabis sativa
PK02403.1
I
0.818
Cla000716
Citrullus lanatus
Cla000716
I
0.818
evm.TU.supercontig_55.116
Carica papaya
evm.TU.supercontig_55.116
I
0.818
Cucsa.102550
Cucumis sativus
Cucsa.102550
I
0.818
mgf009315m
Mimulus guttatus
mgf009315m
I
0.818
Gorai.003G025900
Gossypium raimondii
Gorai.003G025900
I
0.818
SapurV1A.0689s0070
Salix purpurea
SapurV1A.0689s0070
I
0.818
TOE3
Vitis vinifera
VIT_07s0031g00220
I
0.818
GSMUA_AchrUn_randomG16200_001
Musa acuminata
GSMUA_AchrUn_randomG16200_001
I
0.818
POPTR_0007s10780
Populus trichocarpa
POPTR_0007s10780
I
0.818
GLYMA05G18041
Glycine max
GLYMA05G18041
I
0.818
PGSC0003DMG400004006
Solanum tuberosum
PGSC0003DMG400004006
I
0.818
MTR_5g016810
Medicago truncatula
MTR_5g016810
I
0.818
Bo4g070350
Brassica oleracea
Bo4g070350
I
0.818
Bra011939
Brassica rapa
Bra011939
I
0.818
GSMUA_Achr3G13180_001
Musa acuminata
GSMUA_Achr3G13180_001
I
0.818
GLYMA01G39520
Glycine max
GLYMA01G39520
I
0.818
GLYMA17G18640
Glycine max
GLYMA17G18640
I
0.818
GSMUA_Achr1G26080_001
Musa acuminata
GSMUA_Achr1G26080_001
I
0.818
Solyc02g093150.2
Solanum lycopersicum
Solyc02g093150.2
I
0.818
GSMUA_Achr5G29290_001
Musa acuminata
GSMUA_Achr5G29290_001
I
0.817
Gorai.008G077800
Gossypium raimondii
Gorai.008G077800
I
0.815
chr1.CM0033.300.nc
Lotus japonicus
chr1.CM0033.300.nc
I
0.815
TCM_000665
Theobroma cacao
TCM_000665
I
0.815
Gorai.007G215900
Gossypium raimondii
Gorai.007G215900
I
0.815
LPERR06G18460
Leersia perrieri
LPERR06G18460
I
0.814
GSMUA_Achr8G18550_001
Musa acuminata
GSMUA_Achr8G18550_001
I
0.814
GSMUA_Achr3G28340_001
Musa acuminata
GSMUA_Achr3G28340_001
I
0.813
Solyc02g064960.2
Solanum lycopersicum
Solyc02g064960.2
I
0.812
OPUNC06G19990
Oryza punctata
OPUNC06G19990
I
0.811
GRMZM2G174784
Zea mays
GRMZM2G174784
I
0.810
OPUNC04G24930
Oryza punctata
OPUNC04G24930
I
0.810
ONIVA04G25920
Oryza nivara
ONIVA04G25920
I
0.810
ONIVA06G26190
Oryza nivara
ONIVA06G26190
I
0.810
OMERI04G22900
Oryza meridionalis
OMERI04G22900
I
0.810
OGLUM04G27380
Oryza glumaepatula
OGLUM04G27380
I
0.810
OGLUM06G23380
Oryza glumaepatula
OGLUM06G23380
I
0.810
OMERI06G22190
Oryza meridionalis
OMERI06G22190
I
0.810
OB06G29960
Oryza brachyantha
OB06G29960
I
0.810
ORUFI04G29120
Oryza rufipogon
ORUFI04G29120
I
0.810
BGIOSGA020813
Oryza indica
BGIOSGA020813
I
0.810
POPTR_0005s18400
Populus trichocarpa
POPTR_0005s18400
I
0.810
PGSC0003DMG400025479
Solanum tuberosum
PGSC0003DMG400025479
I
0.810
ORGLA04G0237800
Oryza glaberrima
ORGLA04G0237800
I
0.810
BGIOSGA017250
Oryza indica
BGIOSGA017250
I
0.810
Si012635m.g
Setaria italica
Si012635m.g
I
0.810
ORUFI06G23930
Oryza rufipogon
ORUFI06G23930
I
0.810
Sb06g030670
Sorghum bicolor
Sb06g030670
I
0.810
Lus10019331.g
Linum usitatissimum
Lus10019331.g
I
0.809
BRADI5G24100
Brachypodium distachyon
BRADI5G24100
I
0.809
Lus10009374.g
Linum usitatissimum
Lus10009374.g
I
0.809
Lus10023165.g
Linum usitatissimum
Lus10023165.g
I
0.808
29169.m000017
Ricinus communis
29169.m000017
I
0.808
cassava12358.valid.m1
Manihot esculenta
cassava12358.valid.m1
I
0.808
Cucsa.051660
Cucumis sativus
Cucsa.051660
I
0.808
Gorai.009G104200
Gossypium raimondii
Gorai.009G104200
I
0.808
Pavir.J37968
Panicum virgatum
Pavir.J37968
I
0.807
PGSC0003DMG400011046
Solanum tuberosum
PGSC0003DMG400011046
I
0.807
AMTR_s00058p00216470
Amborella trichopoda
AMTR_s00058p00216470
I
0.807
MTR_7g100590
Medicago truncatula
MTR_7g100590
I
0.805
Ca_12010
Cicer arietinum
Ca_12010
I
0.805
cassava2301.valid.m1
Manihot esculenta
cassava2301.valid.m1
I
0.804
Q9XHD3_PETHY
Petunia x hybrida
Q9XHD3_PETHY
D
0.804
MDP0000137561
Malus domestica
MDP0000137561
I
0.803
GSMUA_Achr11G23870_001
Musa acuminata
GSMUA_Achr11G23870_001
I
0.802
Eucgr.I00892
Eucalyptus grandis
Eucgr.I00892
I
0.802
evm.TU.supercontig_114.55
Carica papaya
evm.TU.supercontig_114.55
I
0.802
PRUPE_ppa003783mg
Prunus persica
PRUPE_ppa003783mg
I
0.802
gene23876-v1.0-hybrid
Fragaria vesca
gene23876-v1.0-hybrid
I
0.802
Pm030172
Prunus mume
Pm030172
I
0.802
mgf010466m
Mimulus guttatus
mgf010466m
I
0.800
orange1.1g010763m.g
Citrus sinensis
orange1.1g010763m.g
I
0.800
mgf005133m
Mimulus guttatus
mgf005133m
I
0.800
Ciclev10031306m.g
Citrus clementina
Ciclev10031306m.g
I
0.800
Solyc06g075510.2
Solanum lycopersicum
Solyc06g075510.2
I
0.800
SapurV1A.0038s0220
Salix purpurea
SapurV1A.0038s0220
I
0.799
GLYMA19G36200
Glycine max
GLYMA19G36200
I
0.799
Gorai.011G106200
Gossypium raimondii
Gorai.011G106200
I
0.798
GSMUA_Achr5G07270_001
Musa acuminata
GSMUA_Achr5G07270_001
I
0.798
GLYMA15G04930
Glycine max
GLYMA15G04930
I
0.797
Lus10026477.g
Linum usitatissimum
Lus10026477.g
I
0.797
Lus10019905.g
Linum usitatissimum
Lus10019905.g
I
0.797
POPTR_0008s04490
Populus trichocarpa
POPTR_0008s04490
I
0.797
MDP0000163645
Malus domestica
MDP0000163645
I
0.796
Lus10018124.g
Linum usitatissimum
Lus10018124.g
I
0.796
GRMZM2G416701
Zea mays
GRMZM2G416701
I
0.787
Sb10g025053
Sorghum bicolor
Sb10g025053
I
0.787
P93632_MAIZE
Zea mays
P93632_MAIZE
D
0.787
GRMZM2G160730
Zea mays
GRMZM2G160730
I
0.787
Cla018549
Citrullus lanatus
Cla018549
I
0.783
Pavir.J27340
Panicum virgatum
Pavir.J27340
I
0.783
Lus10015055.g
Linum usitatissimum
Lus10015055.g
I
0.783
orange1.1g009943m.g
Citrus sinensis
orange1.1g009943m.g
I
0.782
BRADI1G30337
Brachypodium distachyon
BRADI1G30337
I
0.782
Ciclev10025364m.g
Citrus clementina
Ciclev10025364m.g
I
0.782
GSMUA_Achr8G21030_001
Musa acuminata
GSMUA_Achr8G21030_001
I
0.781
MLOC_43041
Hordeum vulgare
MLOC_43041
I
0.781
Lus10004990.g
Linum usitatissimum
Lus10004990.g
I
0.781
cassava13884.valid.m1
Manihot esculenta
cassava13884.valid.m1
I
0.780
evm.TU.supercontig_139.43
Carica papaya
evm.TU.supercontig_139.43
I
0.780
Pavir.Da00466
Panicum virgatum
Pavir.Da00466
I
0.779
Thhalv10004742m.g
Eutrema salsugineum
Thhalv10004742m.g
I
0.778
Bra012139
Brassica rapa
Bra012139
I
0.778
Bo7g064000
Brassica oleracea
Bo7g064000
I
0.778
Cucsa.065640
Cucumis sativus
Cucsa.065640
I
0.778
Cla020549
Citrullus lanatus
Cla020549
I
0.775
OS03G0818800
Oryza sativa
OS03G0818800
I
0.773
Lus10041595.g
Linum usitatissimum
Lus10041595.g
I
0.772
Carubv10026667m.g
Capsella rubella
Carubv10026667m.g
I
0.768
TOE3
Arabidopsis thaliana
AT5G67180
I
0.768
Cagra.0342s0004
Capsella grandiflora
Cagra.0342s0004
I
0.768
TOE3
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002628
I
0.768
Bostr.0568s0140
Boechera stricta
Bostr.0568s0140
I
0.768
gene25394-v1.0-hybrid
Fragaria vesca
gene25394-v1.0-hybrid
I
0.767
Lus10036141.g
Linum usitatissimum
Lus10036141.g
I
0.764
gene18102-v1.0-hybrid
Fragaria vesca
gene18102-v1.0-hybrid
I
0.763
OLONG_026757
Oryza longistaminata
OLONG_026757
I
0.761
LPERR05G01420
Leersia perrieri
LPERR05G01420
I
0.761
Ciclev10011588m.g
Citrus clementina
Ciclev10011588m.g
I
0.758
Solyc11g072600.1
Solanum lycopersicum
Solyc11g072600.1
I
0.709
PK14490.1
Cannabis sativa
PK14490.1
I
0.709
cassava42433.valid.m1
Manihot esculenta
cassava42433.valid.m1
N
0.708
Traes_7DL_7B0ABD21E
Triticum aestivum
Traes_7DL_7B0ABD21E
I
0.696
Thhalv10025268m.g
Eutrema salsugineum
Thhalv10025268m.g
I
0.683