Eucgr.C00780 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.C00780 T008124_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF018
M00842_2.00
Arabidopsis thaliana
HRCCGDCMN

NKGHCGGYD
PBM
Franco-Zorrilla et al.(2014)
ORA47
0.804 0.940
ERF018
M01610_2.00
Arabidopsis thaliana
NRCCGNCHN

NDGNCGGYN
PBM
Weirauch et al.(2014)
pTH7215
0.804 0.940
ERF017
M06568_2.00
Arabidopsis thaliana
NHNYCRCCGWCMWH

DWKGWCGGYGRNDN
Dap-seq
OMalley et al.(2016)
At1g19210_col_a
0.788 0.920
ERF017
M06569_2.00
Arabidopsis thaliana
NNNHNNCRCCGWCMW

WKGWCGGYGNNDNNN
Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a
0.788 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C00780.1 AP2 29 80

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.814
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.814
Pm027117 Prunus mume Pm027117 I 0.812
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.812
29739.m003716 Ricinus communis 29739.m003716 I 0.812
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.807
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.806
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.805
TCM_037415 Theobroma cacao TCM_037415 I 0.804
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.804
ERF018 Arabidopsis thaliana AT1G74930 D 0.804
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.804
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.803
Bra015882 Brassica rapa Bra015882 I 0.803
Bo6g119120 Brassica oleracea Bo6g119120 I 0.800
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.799
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.799
Bo8g068370 Brassica oleracea Bo8g068370 I 0.798
Bra016518 Brassica rapa Bra016518 I 0.798
Bra031069 Brassica rapa Bra031069 I 0.797
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.797
Bo8g102870 Brassica oleracea Bo8g102870 I 0.797
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.796
MDP0000649022 Malus domestica MDP0000649022 I 0.796
Bra003780 Brassica rapa Bra003780 I 0.796
Bo6g086740 Brassica oleracea Bo6g086740 I 0.796
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.796
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.796
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.795
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.795
Cla007584 Citrullus lanatus Cla007584 I 0.792
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.792
mgf024162m Mimulus guttatus mgf024162m I 0.791
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.789
MDP0000704216 Malus domestica MDP0000704216 I 0.789
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.788
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.788
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.788
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.788
ERF017 Arabidopsis thaliana AT1G19210 D 0.788
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.787
mgf021940m Mimulus guttatus mgf021940m I 0.786
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.785
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.785
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.785
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.785
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.785
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.784
TCM_037486 Theobroma cacao TCM_037486 I 0.784
Cla011318 Citrullus lanatus Cla011318 I 0.783
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.783
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.783
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.782
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.781
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.781
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.781
Ca_01683 Cicer arietinum Ca_01683 I 0.781
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.780
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.780
29739.m003647 Ricinus communis 29739.m003647 I 0.780
Ca_09124 Cicer arietinum Ca_09124 I 0.780
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.780
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.779
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.779
mgf025452m Mimulus guttatus mgf025452m I 0.778
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.776
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.776
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.774
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.773
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.773
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.771
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.771
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.771
Si019636m.g Setaria italica Si019636m.g I 0.770
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.770
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.770
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.769
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.767
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.767
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.766
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.764
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.762
Bra025719 Brassica rapa Bra025719 I 0.761
Ca_19295 Cicer arietinum Ca_19295 I 0.760
Ca_19297 Cicer arietinum Ca_19297 I 0.759
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.758
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.758
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.758
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.758
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.756
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.756
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.755
Ca_19296 Cicer arietinum Ca_19296 I 0.755
Bra006599 Brassica rapa Bra006599 I 0.751
Bo3g015600 Brassica oleracea Bo3g015600 I 0.751
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.750
Bo9g149820 Brassica oleracea Bo9g149820 I 0.750
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.750
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.750
Bra002377 Brassica rapa Bra002377 I 0.750
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.749
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.749
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.748
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.747
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.747
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.747
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.745
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.744
ERF016 Arabidopsis thaliana AT5G21960 I 0.744
Cla022291 Citrullus lanatus Cla022291 I 0.743
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.743
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.741
Bo2g023630 Brassica oleracea Bo2g023630 I 0.740
Bra020162 Brassica rapa Bra020162 I 0.739
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.734
PK18548.1 Cannabis sativa PK18548.1 I 0.733
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.731
OS02G0781300 Oryza sativa OS02G0781300 I 0.731
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.731
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.731
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.731
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.731
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.731
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.731
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.728
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.727
Si008104m.g Setaria italica Si008104m.g I 0.725
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.722
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.720
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.719
OBART08G16950 Oryza barthii OBART08G16950 I 0.699
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.699
OB08G24280 Oryza brachyantha OB08G24280 I 0.699
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.699
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.699
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.699
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.699
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.699
Si015027m.g Setaria italica Si015027m.g I 0.699
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.699
OS08G0454000 Oryza sativa OS08G0454000 I 0.699
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.699
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.699
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.693
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.692
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.691
F775_23111 Aegilops tauschii F775_23111 I 0.690
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.686
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.681