Eucgr.F00192 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F00192 T008156_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-10
M00850_2.00
Arabidopsis thaliana
NNRCCGHCNN

NNGDCGGYNN
PBM
Franco-Zorrilla et al.(2014)
DEAR4
0.791 0.940
ERF010
M06690_2.00
Arabidopsis thaliana
HHNHHDYCACCGHCD

HGDCGGTGRHDDNDD
Dap-seq
OMalley et al.(2016)
DEAR2_col_a
0.790 0.900
ERF010
M06691_2.00
Arabidopsis thaliana
NNNHDBCACCGACAH

DTGTCGGTGVHDNNN
Dap-seq
OMalley et al.(2016)
DEAR2_colamp_a
0.790 0.900
ERF011
M06628_2.00
Arabidopsis thaliana
YHNHHDYCACCGHCN

NGDCGGTGRHDDNDR
Dap-seq
OMalley et al.(2016)
CEJ1_col_a
0.789 0.880
ERF011
M06629_2.00
Arabidopsis thaliana
NDNCACCGACMHH

DDKGTCGGTGNHN
Dap-seq
OMalley et al.(2016)
CEJ1_colamp_a
0.789 0.880
ERF008
M00844_2.00
Arabidopsis thaliana
SHRCCGHC

GDCGGYDS
PBM
Franco-Zorrilla et al.(2014)
DEAR3
0.788 0.940
ERF008
M01048_2.00
Arabidopsis thaliana
CRCCGMCN

NGKCGGYG
PBM
Sullivan et al.(2014)
pTH7672
0.788 0.940
ERF008
M06602_2.00
Arabidopsis thaliana
NNNNNBCACCGACAHHN

NDDTGTCGGTGVNNNNN
Dap-seq
OMalley et al.(2016)
DEAR3_col_a
0.788 0.940
ERF008
M06603_2.00
Arabidopsis thaliana
NNBCACCGACAWH

DWTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
DEAR3_colamp_a
0.788 0.940
RAP2-1
M06582_2.00
Arabidopsis thaliana
NHDYCRCCGMCAH

DTGKCGGYGRHDN
Dap-seq
OMalley et al.(2016)
RAP21_col_a
0.772 0.940
RAP2-1
M06583_2.00
Arabidopsis thaliana
NHDBCACCGACAHHDNNNNN

NNNNNHDDTGTCGGTGVHDN
Dap-seq
OMalley et al.(2016)
RAP21_colamp_a
0.772 0.940
RAP2-9
M06633_2.00
Arabidopsis thaliana
NNNNNNNDBCACCGACMHH

DDKGTCGGTGVHNNNNNNN
Dap-seq
OMalley et al.(2016)
DEAR5_col_a
0.769 0.920
RAP2-9
M06634_2.00
Arabidopsis thaliana
NCACCGACMHH

DDKGTCGGTGN
Dap-seq
OMalley et al.(2016)
DEAR5_colamp_a
0.769 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F00192.1 AP2 41 92

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MYC2 Arabidopsis thaliana AT1G32640 D 0.000
MYC4 Arabidopsis thaliana AT4G17880 D 0.000
MYC3 Arabidopsis thaliana AT5G46760 D 0.000
Bo01130s010 Brassica oleracea Bo01130s010 I 0.000
Bo1g017990 Brassica oleracea Bo1g017990 I 0.000
Bo5g086990 Brassica oleracea Bo5g086990 I 0.000
Bo7g075710 Brassica oleracea Bo7g075710 I 0.000
Bo8g028850 Brassica oleracea Bo8g028850 I 0.000
Bo9g065530 Brassica oleracea Bo9g065530 I 0.000
Bostr.28243s0060 Boechera stricta Bostr.28243s0060 I 0.000
Bostr.30275s0255 Boechera stricta Bostr.30275s0255 I 0.000
Bostr.3359s0090 Boechera stricta Bostr.3359s0090 I 0.000
Bra010178 Brassica rapa Bra010178 I 0.000
Bra013263 Brassica rapa Bra013263 I 0.000
Bra017523 Brassica rapa Bra017523 I 0.000
Bra017527 Brassica rapa Bra017527 I 0.000
Bra024998 Brassica rapa Bra024998 I 0.000
Cagra.0751s0023 Capsella grandiflora Cagra.0751s0023 I 0.000
Cagra.3356s0080 Capsella grandiflora Cagra.3356s0080 I 0.000
Cagra.7865s0024 Capsella grandiflora Cagra.7865s0024 I 0.000
Carubv10004392m.g Capsella rubella Carubv10004392m.g I 0.000
Carubv10008586m.g Capsella rubella Carubv10008586m.g I 0.000
Carubv10028441m.g Capsella rubella Carubv10028441m.g I 0.000
Ca_09378 Cicer arietinum Ca_09378 I 0.000
Ca_11514 Cicer arietinum Ca_11514 I 0.000
Ca_12352 Cicer arietinum Ca_12352 I 0.000
chr2.CM0177.830.nc Lotus japonicus chr2.CM0177.830.nc I 0.000
Cla008954 Citrullus lanatus Cla008954 I 0.000
Cucsa.321840 Cucumis sativus Cucsa.321840 I 0.000
fgenesh2_kg.7__2520__AT4G17880.1 Arabidopsis lyrata fgenesh2_kg.7__2520__AT4G17880.1 I 0.000
gene10501-v1.0-hybrid Fragaria vesca gene10501-v1.0-hybrid I 0.000
GLYMA01G02251 Glycine max GLYMA01G02251 I 0.000
GLYMA01G12740 Glycine max GLYMA01G12740 I 0.000
GLYMA02G09670 Glycine max GLYMA02G09670 I 0.000
GLYMA08G36720 Glycine max GLYMA08G36720 I 0.000
GLYMA09G33730 Glycine max GLYMA09G33730 I 0.000
Gorai.003G182100 Gossypium raimondii Gorai.003G182100 I 0.000
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.000
MDP0000029168 Malus domestica MDP0000029168 I 0.000
MDP0000136498 Malus domestica MDP0000136498 I 0.000
mgf002775m Mimulus guttatus mgf002775m I 0.000
MTR_0011s0210 Medicago truncatula MTR_0011s0210 I 0.000
MTR_0250s0040 Medicago truncatula MTR_0250s0040 I 0.000
MTR_4g066380 Medicago truncatula MTR_4g066380 I 0.000
MTR_4g066460 Medicago truncatula MTR_4g066460 I 0.000
MTR_4g067010 Medicago truncatula MTR_4g067010 I 0.000
MTR_4g097950 Medicago truncatula MTR_4g097950 I 0.000
MTR_5g030430 Medicago truncatula MTR_5g030430 I 0.000
MTR_6g047550 Medicago truncatula MTR_6g047550 I 0.000
MTR_6g047570 Medicago truncatula MTR_6g047570 I 0.000
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.000
PGSC0003DMG400001161 Solanum tuberosum PGSC0003DMG400001161 I 0.000
PGSC0003DMG400017535 Solanum tuberosum PGSC0003DMG400017535 I 0.000
PK18474.1 Cannabis sativa PK18474.1 D 0.000
Pm023237 Prunus mume Pm023237 I 0.000
POPTR_0003s09090 Populus trichocarpa POPTR_0003s09090 I 0.000
PRUPE_ppa002404mg Prunus persica PRUPE_ppa002404mg I 0.000
SapurV1A.0151s0080 Salix purpurea SapurV1A.0151s0080 I 0.000
ATMYC2 Arabidopsis lyrata scaffold_103634.1 I 0.000
scaffold_800152.1 Arabidopsis lyrata scaffold_800152.1 I 0.000
Solyc08g076930.1 Solanum lycopersicum Solyc08g076930.1 I 0.000
Thhalv10000808m.g Eutrema salsugineum Thhalv10000808m.g I 0.000
Thhalv10007075m.g Eutrema salsugineum Thhalv10007075m.g I 0.000
Thhalv10024688m.g Eutrema salsugineum Thhalv10024688m.g I 0.000