Eucgr.F01607 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F01607 T008160_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.726 0.878
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.726 0.878
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.726 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F01607.1 AP2 36 87

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.794
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.793
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.793
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.781
Cla022803 Citrullus lanatus Cla022803 I 0.774
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.774
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.758
TCM_034132 Theobroma cacao TCM_034132 I 0.755
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.753
Cla021113 Citrullus lanatus Cla021113 I 0.751
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.750
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.750
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.750
Pm006274 Prunus mume Pm006274 I 0.750
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.749
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.749
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.749
30170.m014115 Ricinus communis 30170.m014115 I 0.749
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.749
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.748
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.747
mgf024545m Mimulus guttatus mgf024545m I 0.747
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.746
Solyc04g080910.1 Solanum lycopersicum Solyc04g080910.1 I 0.743
PGSC0003DMG400003706 Solanum tuberosum PGSC0003DMG400003706 I 0.743
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.739
MDP0000250924 Malus domestica MDP0000250924 I 0.738
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.737
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.737
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.737
Ca_10770 Cicer arietinum Ca_10770 I 0.737
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.737
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.733
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.733
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.732
Bra008200 Brassica rapa Bra008200 I 0.727
Bo2g083920 Brassica oleracea Bo2g083920 I 0.727
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.726
Bra015840 Brassica rapa Bra015840 I 0.726
DREB2D Arabidopsis thaliana AT1G75490 D 0.726
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.726
Bo6g119660 Brassica oleracea Bo6g119660 I 0.726
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.726
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.726
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.726
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.726
MDP0000141335 Malus domestica MDP0000141335 I 0.723
MDP0000295902 Malus domestica MDP0000295902 I 0.723
TCM_026121 Theobroma cacao TCM_026121 I 0.721
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.713
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.713
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.713
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.713
Bra003752 Brassica rapa Bra003752 I 0.713
OB08G30790 Oryza brachyantha OB08G30790 I 0.713
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.713
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.713
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.713
DREB2C Oryza sativa OS08G0565200 I 0.713
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.713
Bo6g086320 Brassica oleracea Bo6g086320 I 0.713
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.713
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.710
Si024059m.g Setaria italica Si024059m.g I 0.710
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.710
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.710
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.710
F775_02345 Aegilops tauschii F775_02345 I 0.710
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.710
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.710
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.709
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.707
MDP0000250927 Malus domestica MDP0000250927 I 0.706
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.704
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.703
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.700
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.698
Pm003634 Prunus mume Pm003634 I 0.696
F775_01779 Aegilops tauschii F775_01779 I 0.695
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.695
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.694
MDP0000446783 Malus domestica MDP0000446783 I 0.694
MDP0000147009 Malus domestica MDP0000147009 I 0.694
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.693
Pm018989 Prunus mume Pm018989 I 0.692
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.692
MDP0000165880 Malus domestica MDP0000165880 I 0.691
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.690
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.687
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.684
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.683
F775_32062 Aegilops tauschii F775_32062 I 0.682
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.682
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.682
SELMODRAFT_38498 Selaginella moellendorffii SELMODRAFT_38498 N 0.682
TRIUR3_03342 Triticum urartu TRIUR3_03342 N 0.682
SELMODRAFT_38500 Selaginella moellendorffii SELMODRAFT_38500 N 0.682
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.682
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.681
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.679
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.678
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.678