Eucgr.F02976 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.F02976 T008169_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.686 0.760
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.686 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F02976.1 AP2 22 73

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF021 Arabidopsis thaliana AT1G71450 D 0.686
TCM_036269 Theobroma cacao TCM_036269 I 0.732
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.704
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.739
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.704
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.714
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.719
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.729
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.686
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.728
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.741
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.686
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.696
28118.m000034 Ricinus communis 28118.m000034 I 0.693
27805.m000021 Ricinus communis 27805.m000021 I 0.738
TCM_036270 Theobroma cacao TCM_036270 I 0.717
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.694
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.694
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.694
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.694
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.734
Ca_15064 Cicer arietinum Ca_15064 I 0.687
Cla012661 Citrullus lanatus Cla012661 I 0.719
Cla012665 Citrullus lanatus Cla012665 I 0.719
Pm004269 Prunus mume Pm004269 I 0.704
Pm004272 Prunus mume Pm004272 I 0.742
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.701
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.702
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.711
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.695
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.699
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.738
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.761
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.709
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.709
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.761
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.738
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.742
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.689
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.704
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.695
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.696
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.735
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.737
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.713
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.695
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.719
Gorai.009G266700 Gossypium raimondii Gorai.009G266700 I 0.714
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.714
MDP0000122739 Malus domestica MDP0000122739 I 0.752
MDP0000122740 Malus domestica MDP0000122740 I 0.752
MDP0000151428 Malus domestica MDP0000151428 I 0.752
MDP0000283350 Malus domestica MDP0000283350 I 0.698
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.727
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.688
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.686
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.730
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.704
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.704
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.695
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.684
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.696
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.694
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.696
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.704
F775_17299 Aegilops tauschii F775_17299 I 0.694
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.694
Bra028009 Brassica rapa Bra028009 I 0.724
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.710
ERF022 Arabidopsis thaliana AT1G33760 I 0.741
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.695
Bo2g072910 Brassica oleracea Bo2g072910 I 0.686
Bo5g086680 Brassica oleracea Bo5g086680 I 0.720
Bo6g046850 Brassica oleracea Bo6g046850 I 0.718
Bo6g113020 Brassica oleracea Bo6g113020 I 0.680
Bo8g027240 Brassica oleracea Bo8g027240 I 0.747
Bra010210 Brassica rapa Bra010210 I 0.723
Bra016136 Brassica rapa Bra016136 I 0.680
OB11G16300 Oryza brachyantha OB11G16300 I 0.695
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.695
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.700
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.710
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.721
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.738
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.705
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.709
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.734
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.704
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.740
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.695
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.727
Si026882m.g Setaria italica Si026882m.g I 0.715
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.711
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.732
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.719
OS11G0242300 Oryza sativa OS11G0242300 I 0.695
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.695
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.695
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.695
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.695
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.695
ONIVA04G11950 Oryza nivara ONIVA04G11950 N 0.683
LPERR04G10650 Leersia perrieri LPERR04G10650 N 0.684
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N 0.683
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.686
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.678
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.704
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N 0.683
OMERI04G12360 Oryza meridionalis OMERI04G12360 N 0.683