Eucgr.G02326 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.G02326 T008191_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK24580.1
M01101_2.00 		Cannabis sativa
VGCCGGCM
KGCCGGCB		 PBM
Lambert et al.(2019)
pTH11280 		0.744 0.765
ERF118
M01047_2.00 		Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN		 PBM
Sullivan et al.(2014)
pTH7330 		0.712 0.686
ERF118
M06591_2.00 		Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR		 Dap-seq
OMalley et al.(2016)
CRF10_col100_a 		0.712 0.686
ERF118
M06592_2.00 		Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN		 Dap-seq
OMalley et al.(2016)
CRF10_colamp_a 		0.712 0.686
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G02326.1 AP2 118 170

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK24580.1 Cannabis sativa PK24580.1 D 0.744
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.730
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.730
LjSGA_016572.1 Lotus japonicus LjSGA_016572.1 I 0.730
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.726
Cla008128 Citrullus lanatus Cla008128 I 0.726
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.724
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.720
ERF118 Arabidopsis thaliana AT1G68550 D 0.712
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.710
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.710
MDP0000119956 Malus domestica MDP0000119956 I 0.707
MDP0000743350 Malus domestica MDP0000743350 I 0.707
gene25185-v1.0-hybrid Fragaria vesca gene25185-v1.0-hybrid I 0.704
gene03751-v1.0-hybrid Fragaria vesca gene03751-v1.0-hybrid I 0.701
MDP0000759299 Malus domestica MDP0000759299 I 0.694
Pm029052 Prunus mume Pm029052 I 0.690
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.689
PRUPE_ppa008514mg Prunus persica PRUPE_ppa008514mg I 0.686
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.683
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.682
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.681
Cla021763 Citrullus lanatus Cla021763 I 0.680
Ca_05485 Cicer arietinum Ca_05485 I 0.678
Solyc05g009450.1 Solanum lycopersicum Solyc05g009450.1 I 0.677
Lus10007841.g Linum usitatissimum Lus10007841.g I 0.677