EuGene.0400010262 (Micromonas sp RCC299)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 EuGene.0400010262 T008242_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q6SA75_TOBAC
M09733_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_01
0.678 0.683
Q6SA75_TOBAC
M09734_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ANTL_02
0.678 0.683
ANT
M02647_2.00
Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW

WDNRCHTBGGGAWNYGTGYNH
SELEX
Mathelier et al.(2014)
MA0571.1
0.677 0.683
ANT
M09705_2.00
Arabidopsis thaliana
CACRNWTCCCRAKG

CMTYGGGAWNYGTG
Transfac
Matys et al.(2006)
P$ANT_01
0.677 0.683
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
57733 AP2 189 253
57733 AP2 295 347

Links

Other AP2 family TFs
Other Micromonas sp RCC299 TFs

Invalid Input OrderBy

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action