evm.TU.supercontig_36.41 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_36.41 T008301_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF014
M06581_2.00
Arabidopsis thaliana
YCDYCDCCACCGHCD

HGDCGGTGGHGRHGR
Dap-seq
OMalley et al.(2016)
AT1G44830_col_a
0.796 1.000
ERF012
M06570_2.00
Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC

GDCGGTGGHDDHDDNDNNDN
Dap-seq
OMalley et al.(2016)
DREB26_col_a
0.782 0.960
ERF013
M06601_2.00
Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN

NNNNNNDNHDDTGDCGGTGRH
Dap-seq
OMalley et al.(2016)
At1g77640_col_a
0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_36.41 AP2 30 81

Links

Other AP2 family TFs
Other Carica papaya TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_190401 Agaricus bisporus AGABI2DRAFT_190401 N 0.000
BN946_scf185014.g71 Trametes cinnabarina BN946_scf185014.g71 I 0.000
CCM_01630 Cordyceps militaris CCM_01630 N 0.000
CY34DRAFT_804807 Suillus luteus CY34DRAFT_804807 N 0.000
GALMADRAFT_239880 Galerina marginata GALMADRAFT_239880 N 0.000
GLOTRDRAFT_71884 Gloeophyllum trabeum GLOTRDRAFT_71884 N 0.000
GMDG_02536 Pseudogymnoascus destructans GMDG_02536 I 0.000
JAAARDRAFT_32137 Jaapia argillacea JAAARDRAFT_32137 N 0.000
K443DRAFT_672745 Laccaria amethystina K443DRAFT_672745 N 0.000
LACBIDRAFT_306097 Laccaria bicolor LACBIDRAFT_306097 N 0.000
M378DRAFT_157099 Amanita muscaria M378DRAFT_157099 N 0.000
M413DRAFT_105950 Hebeloma cylindrosporum M413DRAFT_105950 N 0.000
Moror_8326 Moniliophthora roreri Moror_8326 N 0.000
PABG_03064 Paracoccidioides brasiliensis PABG_03064 I 0.000
PILCRDRAFT_823114 Piloderma croceum PILCRDRAFT_823114 N 0.000
SCHCODRAFT_13988 Schizophyllum commune SCHCODRAFT_13988 N 0.000
SERLA73DRAFT_186737 Serpula lacrymans SERLA73DRAFT_186737 N 0.000
V499_02495 Pseudogymnoascus pannorum V499_02495 I 0.000
YALI0_F05346g Yarrowia lipolytica YALI0_F05346g N 0.000