evm.TU.supercontig_51.136 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_51.136 T008311_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.831 0.980
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.831 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_51.136 AP2 40 91

Links

Other AP2 family TFs
Other Carica papaya TFs

Invalid Input OrderBy

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action