evm.TU.supercontig_51.23 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_51.23 T008312_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
DREB2G
M06662_2.00
Arabidopsis thaliana
DCCRCCGCYDYHDYH

DRHDRHRGCGGYGGH
Dap-seq
OMalley et al.(2016)
At5g18450_col_a
0.783 0.918
DREB2D
M01611_2.00
Arabidopsis thaliana
NNRCCGHNN

NNDCGGYNN
PBM
Weirauch et al.(2014)
pTH8108
0.723 0.837
DREB2D
M06597_2.00
Arabidopsis thaliana
YHNYYDCCRCCGYYD

HRRCGGYGGHRRNDR
Dap-seq
OMalley et al.(2016)
At1g75490_col_a
0.723 0.837
DREB2D
M06598_2.00
Arabidopsis thaliana
HNNHDYCACCGHYWN

NWRDCGGTGRHDNND
Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a
0.723 0.837
PK07402.1
M01097_2.00
Cannabis sativa
NVRCCGMCH

DGKCGGYBN
PBM
Lambert et al.(2019)
pTH11436
0.707 0.837
PK08602.1
M01098_2.00
Cannabis sativa
NYCACCGCYN

NRGCGGTGRN
PBM
Lambert et al.(2019)
pTH11421
0.687 0.796
Q8H769_WHEAT
M09721_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$DREB1_01
0.683 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_51.23 AP2 43 94

Links

Other AP2 family TFs
Other Carica papaya TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cmyd_10000498 Chelonia mydas Cmyd_10000498 I 0.000
ENSAMEG00000018448 Ailuropoda melanoleuca ENSAMEG00000018448 I 0.000
ENSAMXG00000017019 Astyanax mexicanus ENSAMXG00000017019 I 0.000
ENSCSAG00000006798 Chlorocebus sabaeus ENSCSAG00000006798 I 0.000
ENSEEUG00000015025 Erinaceus europaeus ENSEEUG00000015025 I 0.000
ENSLACG00000011281 Latimeria chalumnae ENSLACG00000011281 I 0.000
ENSLOCG00000014725 Lepisosteus oculatus ENSLOCG00000014725 I 0.000
ENSMEUG00000002761 Macropus eugenii ENSMEUG00000002761 I 0.000
ENSMPUG00000009072 Mustela putorius furo ENSMPUG00000009072 I 0.000
ENSNLEG00000013783 Nomascus leucogenys ENSNLEG00000013783 I 0.000
ENSOARG00000005806 Ovis aries ENSOARG00000005806 I 0.000
ENSONIG00000000809 Oreochromis niloticus ENSONIG00000000809 I 0.000
ENSP00000395535 Macaca fascicularis ENSP00000395535 I 0.000
ENSP00000395535-D1 Bos grunniens ENSP00000395535-D1 I 0.000
ENSPANG00000011691 Papio anubis ENSPANG00000011691 I 0.000
ENSPFOG00000002307 Poecilia formosa ENSPFOG00000002307 I 0.000
ENSPPYG00000020866 Pongo abelii ENSPPYG00000020866 I 0.000
ENSPSIG00000002254 Pelodiscus sinensis ENSPSIG00000002254 I 0.000
ENSSHAG00000007851 Sarcophilus harrisii ENSSHAG00000007851 I 0.000
ENSSSCG00000012796 Sus scrofa ENSSSCG00000012796 I 0.000
ENSSTOG00000006094 Ictidomys tridecemlineatus ENSSTOG00000006094 I 0.000
ENSTSYG00000007420 Tarsius syrichta ENSTSYG00000007420 I 0.000
ENSXMAG00000003522 Xiphophorus maculatus ENSXMAG00000003522 I 0.000
MECP2 Loxodonta africana ENSLAFG00000016292 I 0.000
MECP2 Pan troglodytes ENSPTRG00000022424 I 0.000
Mecp2 Rattus norvegicus ENSRNOG00000056659 I 0.000
MECP2 Sorex araneus ENSSARG00000012925 I 0.000
MECP2 Cavia porcellus ENSCPOG00000012579 I 0.000
MECP2 Callithrix jacchus ENSCJAG00000016796 I 0.000
mecp2 Tetraodon nigroviridis ENSTNIG00000005114 I 0.000
mecp2 Takifugu rubripes ENSTRUG00000006419 I 0.000
MECP2 Tursiops truncatus ENSTTRG00000004653 I 0.000
MECP2 Anolis carolinensis ENSACAG00000012519 I 0.000
MECP2 Canis familiaris ENSCAFG00000019440 I 0.000
MECP2 Bos taurus ENSBTAG00000047855 I 0.000
mecp2 Xenopus tropicalis XB-GENE-494740 I 0.000
mecp2 Danio rerio ENSDARG00000014218 I 0.000
MECP2 Dasypus novemcinctus ENSDNOG00000013419 I 0.000
MECP2 Myotis lucifugus ENSMLUG00000014297 I 0.000
MECP2 Microcebus murinus ENSMICG00000005149 I 0.000
MECP2 Gorilla gorilla ENSGGOG00000000222 I 0.000
MECP2 Macaca mulatta ENSMMUG00000018704 I 0.000
MECP2 Monodelphis domestica ENSMODG00000011643 I 0.000
mecp2 Gasterosteus aculeatus ENSGACG00000000798 I 0.000
Mecp2 Mus musculus ENSMUSG00000031393 D 0.000
MECP2 Homo sapiens ENSG00000169057 D 0.000
MECP2 Ornithorhynchus anatinus ENSOANG00000011024 I 0.000
MECP2 Felis catus ENSFCAG00000011389 I 0.000
MECP2 Procavia capensis ENSPCAG00000011826 I 0.000
Mecp2 Dipodomys ordii ENSDORG00000014978 I 0.000
mecp2 Oryzias latipes ENSORLG00000020117 I 0.000
MECP2 Equus caballus ENSECAG00000018208 I 0.000
MECP2 Otolemur garnettii ENSOGAG00000015115 I 0.000
MECP2 Oryctolagus cuniculus ENSOCUG00000013147 I 0.000
mecp2.S Xenopus laevis XB-GENE-494744 I 0.000
Myotis_brandtii_IRAK1_10010673 Myotis brandtii Myotis_brandtii_IRAK1_10010673 I 0.000
Ogr09995 Ophisaurus gracilis Ogr09995 I 0.000
Pvit_16673 Pogona vitticeps Pvit_16673 I 0.000