evm.TU.supercontig_5.232 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_5.232 T008313_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2C
M00846_2.00 		Arabidopsis thaliana
NNRCCGNNN
NNNCGGYNN		 PBM
Franco-Zorrilla et al.(2014)
DREB2C 		0.711 0.755
DREB2C
M01049_2.00 		Arabidopsis thaliana
VRCCGVCW
WGBCGGYB		 PBM
Sullivan et al.(2014)
pTH9747 		0.711 0.755
DREB2C
M06611_2.00 		Arabidopsis thaliana
DCCDCCRCCDHYDCCRCCDCM
KGHGGYGGHRDHGGYGGHGGH		 Dap-seq
OMalley et al.(2016)
ERF48_col_a 		0.711 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_5.232 AP2 76 135

Links

Other AP2 family TFs
Other Carica papaya TFs

1 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2C Arabidopsis thaliana AT2G40340 D 0.711