gene16905-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene16905-v1.0-hybrid T008407_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN

NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.724 0.745
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND

HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.724 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna16905.1-v1.0-hybrid AP2 35 86

Links

Other AP2 family TFs
Other Fragaria vesca TFs

Invalid Input OrderBy

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action