Gorai.002G159400 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.002G159400 T008490_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G159400.1 AP2 26 77

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
evm.TU.supercontig_5.71 Carica papaya evm.TU.supercontig_5.71 N 0.766
cassava32861.m1 Manihot esculenta cassava32861.m1 N 0.765
cassava21723.m1 Manihot esculenta cassava21723.m1 N 0.757
PRUPE_ppa020711mg Prunus persica PRUPE_ppa020711mg N 0.750
Pm026227 Prunus mume Pm026227 N 0.745
Eucgr.K02071 Eucalyptus grandis Eucgr.K02071 N 0.742
Cucsa.083150 Cucumis sativus Cucsa.083150 N 0.742
TCM_022462 Theobroma cacao TCM_022462 N 0.734
HRD Vitis vinifera VIT_08s0007g03810 N 0.721
Gorai.009G407200 Gossypium raimondii Gorai.009G407200 N 0.721
orange1.1g039696m.g Citrus sinensis orange1.1g039696m.g N 0.719
Ciclev10012757m.g Citrus clementina Ciclev10012757m.g N 0.719
29092.m000462 Ricinus communis 29092.m000462 N 0.717
Cla017994 Citrullus lanatus Cla017994 N 0.713
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.713
Cla018653 Citrullus lanatus Cla018653 N 0.710
Solyc10g083560.1 Solanum lycopersicum Solyc10g083560.1 I 0.708
PGSC0003DMG400045042 Solanum tuberosum PGSC0003DMG400045042 I 0.707
Gorai.002G241800 Gossypium raimondii Gorai.002G241800 N 0.705
MDP0000195376 Malus domestica MDP0000195376 N 0.702
POPTR_0006s02180 Populus trichocarpa POPTR_0006s02180 N 0.700
Lus10014376.g Linum usitatissimum Lus10014376.g N 0.699
Lus10023873.g Linum usitatissimum Lus10023873.g N 0.699
LjSGA_035548.1 Lotus japonicus LjSGA_035548.1 N 0.696
GLYMA19G37670 Glycine max GLYMA19G37670 N 0.692
GLYMA15G02900 Glycine max GLYMA15G02900 N 0.692
GLYMA03G34970 Glycine max GLYMA03G34970 N 0.692
SapurV1A.0154s0220 Salix purpurea SapurV1A.0154s0220 N 0.691
POPTR_0016s02010 Populus trichocarpa POPTR_0016s02010 N 0.687