Gorai.004G070500 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.004G070500 T008517_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.705 0.714
ERF098
M01618_2.00 		Arabidopsis thaliana
NNGCCGNC
GNCGGCNN		 PBM
Weirauch et al.(2014)
pTH8259 		0.696 0.755
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.695 0.776
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.695 0.776
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.695 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G070500.1 AP2 98 150

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I 0.844
Gorai.004G070600 Gossypium raimondii Gorai.004G070600 I 0.827
MDP0000133485 Malus domestica MDP0000133485 I 0.781
MDP0000907929 Malus domestica MDP0000907929 I 0.781
MDP0000189033 Malus domestica MDP0000189033 I 0.781
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.771
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.771
MDP0000153445 Malus domestica MDP0000153445 I 0.767
MDP0000317950 Malus domestica MDP0000317950 I 0.767
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.740
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.736
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.735
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.735
Ciclev10021132m.g Citrus clementina Ciclev10021132m.g I 0.732
Ca_17211 Cicer arietinum Ca_17211 I 0.730
Lus10029333.g Linum usitatissimum Lus10029333.g I 0.727
MTR_8g006840 Medicago truncatula MTR_8g006840 I 0.726
TCM_005705 Theobroma cacao TCM_005705 I 0.726
Lus10016209.g Linum usitatissimum Lus10016209.g I 0.723
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.723
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.720
Lus10016225.g Linum usitatissimum Lus10016225.g I 0.718
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.718
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.718
TCM_005706 Theobroma cacao TCM_005706 I 0.717
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.713
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.713
Lus10030261.g Linum usitatissimum Lus10030261.g I 0.712
Lus10004011.g Linum usitatissimum Lus10004011.g I 0.712
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.711
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.710
Bo7g040810 Brassica oleracea Bo7g040810 I 0.708
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.708
Bra014925 Brassica rapa Bra014925 I 0.708
Lus10029314.g Linum usitatissimum Lus10029314.g I 0.708
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.708
Lus10016227.g Linum usitatissimum Lus10016227.g I 0.708
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.708
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.706
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.706
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.705
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.705
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.705
Pm017696 Prunus mume Pm017696 I 0.705
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.703
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.703
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.703
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.702
Pm017699 Prunus mume Pm017699 I 0.702
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.702
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.702
Lus10016223.g Linum usitatissimum Lus10016223.g I 0.701
30174.m008755 Ricinus communis 30174.m008755 I 0.700
Lus10029334.g Linum usitatissimum Lus10029334.g I 0.700
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.699
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.699
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.698
Bo1g102220 Brassica oleracea Bo1g102220 I 0.698
Bra023748 Brassica rapa Bra023748 I 0.698
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.697
TCM_005707 Theobroma cacao TCM_005707 I 0.697
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.697
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.696
ERF098 Arabidopsis thaliana AT3G23230 D 0.696
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.696
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.696
ERF13 Arabidopsis thaliana AT2G44840 D 0.695
Bra004873 Brassica rapa Bra004873 I 0.695
Bra037630 Brassica rapa Bra037630 I 0.695
Bo4g024140 Brassica oleracea Bo4g024140 I 0.695
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.695
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.695
Bo4g195220 Brassica oleracea Bo4g195220 I 0.695
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.695
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.695
GLYMA07G14070 Glycine max GLYMA07G14070 I 0.694
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.694
Lus10029319.g Linum usitatissimum Lus10029319.g I 0.693
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.692
Cla021383 Citrullus lanatus Cla021383 I 0.692
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.692
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.690
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.690
30174.m008756 Ricinus communis 30174.m008756 I 0.690
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.690
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.690
30174.m008759 Ricinus communis 30174.m008759 I 0.689
fgenesh2_kg.3__2538__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.3__2538__AT3G23230.1 I 0.687
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.687
fgenesh2_kg.471__1__AT3G23230.1 Arabidopsis lyrata fgenesh2_kg.471__1__AT3G23230.1 I 0.687
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.686
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.686
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.685
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.685
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.685
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.684
MDP0000178398 Malus domestica MDP0000178398 I 0.684
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.683
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.682
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.682
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.681
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.681
SELMODRAFT_73854 Selaginella moellendorffii SELMODRAFT_73854 I 0.681
SELMODRAFT_87463 Selaginella moellendorffii SELMODRAFT_87463 I 0.681
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.679
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.678
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.678
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.678
mgf023779m Mimulus guttatus mgf023779m I 0.677
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.677