Gorai.004G070600 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.004G070600 T008518_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.711 0.708
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD

HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.698 0.771
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD

HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.698 0.771
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN

NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.698 0.771
ERF098
M01618_2.00
Arabidopsis thaliana
NNGCCGNC

GNCGGCNN
PBM
Weirauch et al.(2014)
pTH8259
0.681 0.729
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G070600.1 AP2 99 150

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I 0.827
Gorai.004G070500 Gossypium raimondii Gorai.004G070500 I 0.827
MDP0000189033 Malus domestica MDP0000189033 I 0.794
MDP0000133485 Malus domestica MDP0000133485 I 0.794
MDP0000907929 Malus domestica MDP0000907929 I 0.794
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.784
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.784
MDP0000153445 Malus domestica MDP0000153445 I 0.780
MDP0000317950 Malus domestica MDP0000317950 I 0.780
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.748
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.744
Ca_17211 Cicer arietinum Ca_17211 I 0.742
MTR_8g006840 Medicago truncatula MTR_8g006840 I 0.738
TCM_005705 Theobroma cacao TCM_005705 I 0.738
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.738
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.733
Ciclev10021132m.g Citrus clementina Ciclev10021132m.g I 0.733
Lus10029333.g Linum usitatissimum Lus10029333.g I 0.729
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.729
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.729
TCM_005706 Theobroma cacao TCM_005706 I 0.728
Lus10016209.g Linum usitatissimum Lus10016209.g I 0.725
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.725
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.725
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.725
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.721
Lus10016225.g Linum usitatissimum Lus10016225.g I 0.721
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.721
Pm017696 Prunus mume Pm017696 I 0.719
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.719
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.719
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.718
Lus10004011.g Linum usitatissimum Lus10004011.g I 0.718
Lus10030261.g Linum usitatissimum Lus10030261.g I 0.718
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.717
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.715
Pm017699 Prunus mume Pm017699 I 0.715
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.715
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.715
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.714
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.714
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.713
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.713
Lus10029314.g Linum usitatissimum Lus10029314.g I 0.712
30174.m008755 Ricinus communis 30174.m008755 I 0.712
Lus10016227.g Linum usitatissimum Lus10016227.g I 0.712
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.711
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.711
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.711
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.710
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.710
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.710
TCM_005707 Theobroma cacao TCM_005707 I 0.710
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.709
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.706
Cla021383 Citrullus lanatus Cla021383 I 0.704
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.703
Lus10016223.g Linum usitatissimum Lus10016223.g I 0.703
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.703
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.703
30174.m008756 Ricinus communis 30174.m008756 I 0.703
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.703
30174.m008759 Ricinus communis 30174.m008759 I 0.702
Lus10029334.g Linum usitatissimum Lus10029334.g I 0.702
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.700
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.700
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.700
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.698
Bo4g195220 Brassica oleracea Bo4g195220 I 0.698
Bra004873 Brassica rapa Bra004873 I 0.698
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.698
Bra037630 Brassica rapa Bra037630 I 0.698
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.698
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.698
MDP0000178398 Malus domestica MDP0000178398 I 0.698
GLYMA07G14070 Glycine max GLYMA07G14070 I 0.698
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.698
Bo4g024140 Brassica oleracea Bo4g024140 I 0.698
ERF13 Arabidopsis thaliana AT2G44840 D 0.698
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.697
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.697
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.695
Lus10029319.g Linum usitatissimum Lus10029319.g I 0.695
Thhalv10022108m.g Eutrema salsugineum Thhalv10022108m.g I 0.695
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.695
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.695
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.694
Cucsa.260040 Cucumis sativus Cucsa.260040 I 0.693
Bo7g040810 Brassica oleracea Bo7g040810 I 0.693
Bra014925 Brassica rapa Bra014925 I 0.693
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.691
mgf023779m Mimulus guttatus mgf023779m I 0.690
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.689
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.687
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.687
GLYMA03G26310 Glycine max GLYMA03G26310 I 0.686
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.686
MDP0000122665 Malus domestica MDP0000122665 I 0.683
Bra023748 Brassica rapa Bra023748 I 0.683
MDP0000135205 Malus domestica MDP0000135205 I 0.683
Bo1g102220 Brassica oleracea Bo1g102220 I 0.683
evm.TU.supercontig_44.73 Carica papaya evm.TU.supercontig_44.73 I 0.683
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I 0.682
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.682
GLYMA07G13980 Glycine max GLYMA07G13980 I 0.682
Pm017698 Prunus mume Pm017698 I 0.682
Carubv10015406m.g Capsella rubella Carubv10015406m.g I 0.681
Bostr.19424s0320 Boechera stricta Bostr.19424s0320 I 0.681
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.681
ERF098 Arabidopsis thaliana AT3G23230 D 0.681
Cagra.8559s0002 Capsella grandiflora Cagra.8559s0002 I 0.681
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.681
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.681
Pm017700 Prunus mume Pm017700 I 0.679
Ca_06034 Cicer arietinum Ca_06034 I 0.679
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.678
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.678
Gorai.004G070700 Gossypium raimondii Gorai.004G070700 I 0.677
PGSC0003DMG400010309 Solanum tuberosum PGSC0003DMG400010309 I 0.677
Solyc09g066350.1 Solanum lycopersicum Solyc09g066350.1 I 0.677