Gorai.004G285200 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.004G285200 T008538_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.736 0.860
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.736 0.860
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.734 0.880
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.734 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G285200.1 AP2 47 98

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.757
TCM_037486 Theobroma cacao TCM_037486 I 0.749
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.747
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.746
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.745
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.745
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.744
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.744
Bra031069 Brassica rapa Bra031069 I 0.743
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.743
Bo8g102870 Brassica oleracea Bo8g102870 I 0.743
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.742
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.739
mgf024162m Mimulus guttatus mgf024162m I 0.737
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.736
Ca_09124 Cicer arietinum Ca_09124 I 0.736
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.736
ERF018 Arabidopsis thaliana AT1G74930 D 0.736
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.736
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.735
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.735
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.735
MDP0000704216 Malus domestica MDP0000704216 I 0.735
Bra015882 Brassica rapa Bra015882 I 0.735
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.734
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.734
ERF017 Arabidopsis thaliana AT1G19210 D 0.734
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.734
29739.m003716 Ricinus communis 29739.m003716 I 0.733
mgf021940m Mimulus guttatus mgf021940m I 0.733
Pm027117 Prunus mume Pm027117 I 0.733
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.733
Bo6g119120 Brassica oleracea Bo6g119120 I 0.732
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.732
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.732
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.732
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.730
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.729
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.728
Bo6g086740 Brassica oleracea Bo6g086740 I 0.728
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.728
Bra003780 Brassica rapa Bra003780 I 0.728
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.728
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.727
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.727
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.727
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.726
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.726
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.725
TCM_037415 Theobroma cacao TCM_037415 I 0.725
MDP0000649022 Malus domestica MDP0000649022 I 0.724
mgf025452m Mimulus guttatus mgf025452m I 0.724
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.723
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.723
Cla011318 Citrullus lanatus Cla011318 I 0.723
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.722
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.722
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.722
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.719
Bo8g068370 Brassica oleracea Bo8g068370 I 0.719
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.719
Bra016518 Brassica rapa Bra016518 I 0.719
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.717
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.716
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.715
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.715
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.715
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.714
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.714
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.713
Ca_01683 Cicer arietinum Ca_01683 I 0.711
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.711
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.711
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.711
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.710
Bra025719 Brassica rapa Bra025719 I 0.707
Cla007584 Citrullus lanatus Cla007584 I 0.705
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.705
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.703
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.701
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.701
29739.m003647 Ricinus communis 29739.m003647 I 0.700
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.698
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.696
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.696
Si019636m.g Setaria italica Si019636m.g I 0.695
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.695
PK18548.1 Cannabis sativa PK18548.1 I 0.692
Ca_19295 Cicer arietinum Ca_19295 I 0.686
Bo2g023630 Brassica oleracea Bo2g023630 I 0.686
Bra020162 Brassica rapa Bra020162 I 0.685
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.685
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.685
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.684
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.684
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.684
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.684
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.682
Ca_19296 Cicer arietinum Ca_19296 I 0.681
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.680
Ca_19297 Cicer arietinum Ca_19297 I 0.679
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.677