Gorai.005G049300 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.005G049300 T008543_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
P93392_TOBAC
M09731_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.790 0.918
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.742 0.837
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN

NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.728 0.898
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN

NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.728 0.898
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD

HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.728 0.898
ERF1B
M09703_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.728 0.898
ERF1B
M09704_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.728 0.898
ERF15
M00718_2.00
Arabidopsis thaliana
NGSCGSCB

VGSCGSCN
PBM
Chang et al.(2013)
pTH7336
0.692 0.837
ERF15
M06604_2.00
Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY

RHGGCGGCKVHDNNDNNN
Dap-seq
OMalley et al.(2016)
ERF15_colamp_a
0.692 0.837
ERF15
M06605_2.00
Arabidopsis thaliana
NNYHDYMGCCGCCRY

RYGGCGGCKRHDRNN
Dap-seq
OMalley et al.(2016)
ERF15_col
0.692 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G049300.1 AP2 82 134

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
AAEL011425 Aedes aegypti AAEL011425 I 0.000
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.000
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_10137 Ancylostoma duodenale ANCDUO_10137 N 0.000
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
ANCDUO_26276 Ancylostoma duodenale ANCDUO_26276 N 0.000
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.000
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.000
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.000
ASIM_0001147101 Anisakis simplex ASIM_0001147101 N 0.000
GB47837 Apis mellifera GB47837 N 0.000
ALUE_0000448701 Ascaris lumbricoides ALUE_0000448701 N 0.000
ALUE_0001190701 Ascaris lumbricoides ALUE_0001190701 N 0.000
ALUE_0000605501 Ascaris lumbricoides ALUE_0000605501 N 0.000
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.000
ASU_09087 Ascaris suum ASU_09087 N 0.000
ASU_07820 Ascaris suum ASU_07820 N 0.000
ASU_05994 Ascaris suum ASU_05994 N 0.000
ASU_05752 Ascaris suum ASU_05752 N 0.000
ACEP16621 Atta cephalotes ACEP16621 N 0.000
BGIBMGA005289 Bombyx mori BGIBMGA005289 I 0.000
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
Bm6643 Brugia malayi Bm6643 N 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
CBN25379 Caenorhabditis brenneri CBN25379 I 0.000
CBN04053 Caenorhabditis brenneri CBN04053 N 0.000
CBG04066 Caenorhabditis briggsae CBG04066 N 0.000
CBG09136 Caenorhabditis briggsae CBG09136 N 0.000
CBG20663 Caenorhabditis briggsae CBG20663 N 0.000
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.000
hmg-4 Caenorhabditis elegans WBGene00001974 N 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
CRE11852 Caenorhabditis remanei CRE11852 N 0.000
CRE03995 Caenorhabditis remanei CRE03995 N 0.000
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.000
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.000
Cflo_05893--XP_624266.1_APIME Camponotus floridanus Cflo_05893--XP_624266.1_APIME N 0.000
CapteG172235 Capitella teleta CapteG172235 I 0.000
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.000
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.000
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.000
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.000
KGM_13852 Danaus plexippus KGM_13852 I 0.000
KGM_13851 Danaus plexippus KGM_13851 N 0.000
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.000
nDi.2.2.2.g04713 Dirofilaria immitis nDi.2.2.2.g04713 N 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.000
GF11622 Drosophila ananassae FBgn0088662 I 0.000
GF12460 Drosophila ananassae FBgn0089497 N 0.000
GG19998 Drosophila erecta FBgn0112197 N 0.000
GG20749 Drosophila erecta FBgn0112936 I 0.000
GH20784 Drosophila grimshawi FBgn0128247 I 0.000
GH21151 Drosophila grimshawi FBgn0128613 N 0.000
Ssrp Drosophila melanogaster FBgn0010278 N 0.000
HmgZ Drosophila melanogaster FBgn0010228 I 0.000
GI18750 Drosophila mojavensis FBgn0141489 N 0.000
GI20867 Drosophila mojavensis FBgn0143601 I 0.000
GL11071 Drosophila persimilis FBgn0148681 N 0.000
GL17523 Drosophila persimilis FBgn0155126 I 0.000
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.000
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.000
GM15692 Drosophila sechellia FBgn0170608 I 0.000
GD25013 Drosophila simulans FBgn0196325 N 0.000
GD25171 Drosophila simulans FBgn0196483 I 0.000
GJ20604 Drosophila virilis FBgn0207743 I 0.000
GJ21774 Drosophila virilis FBgn0208892 N 0.000
GK15658 Drosophila willistoni FBgn0217663 I 0.000
GK22092 Drosophila willistoni FBgn0224077 N 0.000
HmgZ Drosophila yakuba FBgn0068145 I 0.000
GE11532 Drosophila yakuba FBgn0229332 N 0.000
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.000
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.000
ECPE_0001309901 Echinostoma caproni ECPE_0001309901 N 0.000
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.000
HCOI01420700 Haemonchus contortus HCOI01420700 N 0.000
HCOI01912600 Haemonchus contortus HCOI01912600 I 0.000
HCOI02106600 Haemonchus contortus HCOI02106600 N 0.000
HCOI01913300 Haemonchus contortus HCOI01913300 I 0.000
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.000
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.000
Hsal_13112--XP_624266.1_APIME Harpegnathos saltator Hsal_13112--XP_624266.1_APIME N 0.000
HMEL015307 Heliconius melpomene HMEL015307 N 0.000
HPBE_0002408301 Heligmosomoides bakeri HPBE_0002408301 I 0.000
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.000
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.000
HDID_0000239001 Hymenolepis diminuta HDID_0000239001 N 0.000
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.000
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I 0.000
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.000
nLs.2.1.2.g02941 Litomosoides sigmodontis nLs.2.1.2.g02941 N 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
LCUP005047 Lucilia cuprina LCUP005047 N 0.000
cassava23716.valid.m1 Manihot esculenta cassava23716.valid.m1 I 0.000
MTR_5g082570 Medicago truncatula MTR_5g082570 I 0.000
MCINX001064 Melitaea cinxia MCINX001064 I 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.000
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.000
Minc01744 Meloidogyne incognita Minc01744 N 0.000
Minc10016 Meloidogyne incognita Minc10016 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
MDOA007633 Musca domestica MDOA007633 N 0.000
MDOA014797 Musca domestica MDOA014797 I 0.000
NECAME_17555 Necator americanus NECAME_17555 N 0.000
NECAME_16525 Necator americanus NECAME_16525 N 0.000
NECAME_17981 Necator americanus NECAME_17981 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.000
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I 0.000
OSTLU_18991 Ostreococcus lucimarinus OSTLU_18991 N 0.000
PTRK_0000111400 Parastrongyloides trichosuri PTRK_0000111400 N 0.000
PTRK_0001161700 Parastrongyloides trichosuri PTRK_0001161700 N 0.000
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.000
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.000
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold98-EXSNAP2012.51 Pristionchus exspectatus scaffold98-EXSNAP2012.51 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.000
PPA06513 Pristionchus pacificus PPA06513 N 0.000
PPA02261 Pristionchus pacificus PPA02261 N 0.000
PPA14042 Pristionchus pacificus PPA14042 N 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
RSKR_0000269200 Rhabditophanes kr3021 RSKR_0000269200 N 0.000
RSKR_0000746900 Rhabditophanes kr3021 RSKR_0000746900 N 0.000
RSKR_0000269500 Rhabditophanes kr3021 RSKR_0000269500 N 0.000
29600.m000548 Ricinus communis 29600.m000548 I 0.000
SCUD_0000070901 Schistosoma curassoni SCUD_0000070901 N 0.000
A_01848 Schistosoma haematobium A_01848 N 0.000
Sjc_0035580 Schistosoma japonicum Sjc_0035580 N 0.000
Smp_148930 Schistosoma mansoni Smp_148930 N 0.000
SMTD_0001155301 Schistosoma mattheei SMTD_0001155301 N 0.000
SINV22588 Solenopsis invicta SINV22588 N 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.000
L889_g29516 Steinernema feltiae L889_g29516 N 0.000
L889_g6592 Steinernema feltiae L889_g6592 N 0.000
L889_g9094 Steinernema feltiae L889_g9094 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L893_g29974 Steinernema glaseri L893_g29974 N 0.000
L898_g4830 Steinernema monticolum L898_g4830 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
L892_g19058 Steinernema scapterisci L892_g19058 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
SPAL_0001421900 Strongyloides papillosus SPAL_0001421900 N 0.000
SPAL_0001085700 Strongyloides papillosus SPAL_0001085700 N 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
SSTP_0000585600 Strongyloides stercoralis SSTP_0000585600 N 0.000
SSTP_0000790100 Strongyloides stercoralis SSTP_0000790100 N 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SVE_0954900 Strongyloides venezuelensis SVE_0954900 N 0.000
SVE_0536900 Strongyloides venezuelensis SVE_0536900 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
SVUK_0001798101 Strongylus vulgaris SVUK_0001798101 N 0.000
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.000
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.000
TsM_000111500 Taenia solium TsM_000111500 N 0.000
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.000
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.000
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.000
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.000
TCNE_0000520101 Toxocara canis TCNE_0000520101 N 0.000