Gorai.008G280600 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.008G280600 T008635_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.692 0.780
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.692 0.780
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.679 0.840
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.679 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G280600.1 AP2 45 96
Gorai.008G280600.2 AP2 54 105

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm019386 Prunus mume Pm019386 I 0.744
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.720
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.705
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.704
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.702
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.700
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.700
Cla006315 Citrullus lanatus Cla006315 I 0.699
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.698
PK23332.1 Cannabis sativa PK23332.1 I 0.698
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.697
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.697
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.697
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.697
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.697
DREB1G Oryza indica BGIOSGA008804 I 0.692
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.692
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.692
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.692
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.692
OBART02G27760 Oryza barthii OBART02G27760 I 0.692
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.692
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.692
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.692
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.692
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.692
DREB1G Oryza sativa OS02G0677300 D 0.692
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.692
mgf026642m Mimulus guttatus mgf026642m I 0.691
mgf017477m Mimulus guttatus mgf017477m N 0.690
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.689
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I 0.688
Ca_00768 Cicer arietinum Ca_00768 N 0.686
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.685
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.683
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.683
Si018262m.g Setaria italica Si018262m.g I 0.682
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.680
Cla011674 Citrullus lanatus Cla011674 I 0.680
DREB1B Arabidopsis thaliana AT4G25490 D 0.679
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.678