Gorai.009G017500 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.009G017500 T008638_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN

NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.803 0.922
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN

NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.748 0.824
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH

DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.748 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G017500.1 AP2 22 73
Gorai.009G017500.2 AP2 20 71
Gorai.009G017500.3 AP2 5 56

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

300 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action