Gorai.009G266700 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.009G266700 T008658_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF021
M06593_2.00
Arabidopsis thaliana
HNYCDYCDYCDYCRCCGHCD

HGDCGGYGRHGRHGRHGRND
Dap-seq
OMalley et al.(2016)
AT1G71450_col_a
0.745 0.860
ERF021
M06594_2.00
Arabidopsis thaliana
NHNNCRCCGHCDH

DHGDCGGYGNNDN
Dap-seq
OMalley et al.(2016)
AT1G71450_colamp_a
0.745 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G266700.1 AP2 10 61

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_036270 Theobroma cacao TCM_036270 I 0.819
Bra010210 Brassica rapa Bra010210 I 0.800
Gorai.009G266600 Gossypium raimondii Gorai.009G266600 I 0.798
evm.TU.supercontig_21.69 Carica papaya evm.TU.supercontig_21.69 I 0.790
GLYMA01G44130 Glycine max GLYMA01G44130 I 0.786
27805.m000021 Ricinus communis 27805.m000021 I 0.786
Bo5g086680 Brassica oleracea Bo5g086680 I 0.785
PRUPE_ppa012354mg Prunus persica PRUPE_ppa012354mg I 0.783
Pm004269 Prunus mume Pm004269 I 0.783
cassava43172.valid.m1 Manihot esculenta cassava43172.valid.m1 I 0.783
POPTR_0019s10420 Populus trichocarpa POPTR_0019s10420 I 0.782
cassava8552.m1 Manihot esculenta cassava8552.m1 I 0.782
SapurV1A.1130s0100 Salix purpurea SapurV1A.1130s0100 I 0.782
SapurV1A.1331s0040 Salix purpurea SapurV1A.1331s0040 I 0.782
Cla012665 Citrullus lanatus Cla012665 I 0.781
gene27021-v1.0-hybrid Fragaria vesca gene27021-v1.0-hybrid I 0.779
POPTR_0013s10340 Populus trichocarpa POPTR_0013s10340 I 0.777
Cucsa.237150 Cucumis sativus Cucsa.237150 I 0.776
Ciclev10023857m.g Citrus clementina Ciclev10023857m.g I 0.775
orange1.1g035756m.g Citrus sinensis orange1.1g035756m.g I 0.775
POPTR_0001s18180 Populus trichocarpa POPTR_0001s18180 I 0.774
MTR_5g008590 Medicago truncatula MTR_5g008590 I 0.773
chr2.CM0018.470.nd Lotus japonicus chr2.CM0018.470.nd I 0.773
GLYMA01G44140 Glycine max GLYMA01G44140 I 0.773
GLYMA11G01640 Glycine max GLYMA11G01640 I 0.773
POPTR_0013s10330 Populus trichocarpa POPTR_0013s10330 I 0.770
evm.TU.supercontig_21.70 Carica papaya evm.TU.supercontig_21.70 I 0.770
SapurV1A.3106s0010 Salix purpurea SapurV1A.3106s0010 I 0.770
SapurV1A.0551s0040 Salix purpurea SapurV1A.0551s0040 I 0.770
Eucgr.F02974 Eucalyptus grandis Eucgr.F02974 I 0.770
POPTR_0019s10430 Populus trichocarpa POPTR_0019s10430 I 0.770
TCM_036269 Theobroma cacao TCM_036269 I 0.769
Bo8g027240 Brassica oleracea Bo8g027240 I 0.769
Gorai.005G116500 Gossypium raimondii Gorai.005G116500 I 0.766
Thhalv10010002m.g Eutrema salsugineum Thhalv10010002m.g I 0.765
ERF022 Arabidopsis thaliana AT1G33760 I 0.764
Eucgr.F02975 Eucalyptus grandis Eucgr.F02975 I 0.764
MDP0000283350 Malus domestica MDP0000283350 I 0.764
SapurV1A.0551s0030 Salix purpurea SapurV1A.0551s0030 I 0.762
28118.m000034 Ricinus communis 28118.m000034 I 0.762
Lus10002953.g Linum usitatissimum Lus10002953.g I 0.760
cassava45911.m1 Manihot esculenta cassava45911.m1 I 0.759
Carubv10012215m.g Capsella rubella Carubv10012215m.g I 0.758
VIT_18s0001g05850 Vitis vinifera VIT_18s0001g05850 I 0.755
Bostr.3359s0006 Boechera stricta Bostr.3359s0006 I 0.752
Ciclev10024063m.g Citrus clementina Ciclev10024063m.g I 0.750
orange1.1g046901m.g Citrus sinensis orange1.1g046901m.g I 0.750
POPTR_0003s05300 Populus trichocarpa POPTR_0003s05300 I 0.749
Solyc11g042580.1 Solanum lycopersicum Solyc11g042580.1 I 0.748
fgenesh2_kg.2__1406__AT1G71450.1 Arabidopsis lyrata fgenesh2_kg.2__1406__AT1G71450.1 I 0.745
Carubv10022349m.g Capsella rubella Carubv10022349m.g I 0.745
Cagra.2418s0001 Capsella grandiflora Cagra.2418s0001 I 0.745
PGSC0003DMG400018054 Solanum tuberosum PGSC0003DMG400018054 I 0.745
ERF021 Arabidopsis thaliana AT1G71450 D 0.745
Bo2g072910 Brassica oleracea Bo2g072910 I 0.745
Carubv10011715m.g Capsella rubella Carubv10011715m.g I 0.744
Bra028009 Brassica rapa Bra028009 I 0.744
Lus10041052.g Linum usitatissimum Lus10041052.g N 0.743
Thhalv10019659m.g Eutrema salsugineum Thhalv10019659m.g I 0.742
Bo6g046850 Brassica oleracea Bo6g046850 I 0.738
SapurV1A.1331s0050 Salix purpurea SapurV1A.1331s0050 I 0.736
SapurV1A.1130s0090 Salix purpurea SapurV1A.1130s0090 I 0.736
Bra016136 Brassica rapa Bra016136 I 0.736
PGSC0003DMG400017813 Solanum tuberosum PGSC0003DMG400017813 I 0.734
Pm004272 Prunus mume Pm004272 I 0.733
PRUPE_ppa018178mg Prunus persica PRUPE_ppa018178mg I 0.733
Bra007975 Brassica rapa Bra007975 I 0.730
scaffold_103754.1 Arabidopsis lyrata scaffold_103754.1 I 0.729
chr2.CM0018.610.nd Lotus japonicus chr2.CM0018.610.nd I 0.729
Bo6g113020 Brassica oleracea Bo6g113020 I 0.728
Lus10006173.g Linum usitatissimum Lus10006173.g I 0.726
Lus10003513.g Linum usitatissimum Lus10003513.g N 0.725
gene27017-v1.0-hybrid Fragaria vesca gene27017-v1.0-hybrid I 0.724
AMTR_s00099p00039760 Amborella trichopoda AMTR_s00099p00039760 I 0.724
Cucsa.237170 Cucumis sativus Cucsa.237170 I 0.723
Cla012661 Citrullus lanatus Cla012661 I 0.723
Lus10041050.g Linum usitatissimum Lus10041050.g I 0.721
MDP0000151428 Malus domestica MDP0000151428 I 0.720
MDP0000122740 Malus domestica MDP0000122740 I 0.720
MDP0000122739 Malus domestica MDP0000122739 I 0.720
Si026882m.g Setaria italica Si026882m.g I 0.715
Eucgr.F02976 Eucalyptus grandis Eucgr.F02976 I 0.714
VIT_18s0001g05890 Vitis vinifera VIT_18s0001g05890 I 0.714
Solyc11g042560.1 Solanum lycopersicum Solyc11g042560.1 I 0.710
AC198403.3_FG001 Zea mays AC198403.3_FG001 I 0.708
Bo6g094210 Brassica oleracea Bo6g094210 I 0.706
Bra003924 Brassica rapa Bra003924 I 0.706
Bostr.10273s0203 Boechera stricta Bostr.10273s0203 I 0.701
MTR_5g008550 Medicago truncatula MTR_5g008550 I 0.700
LPERR11G07100 Leersia perrieri LPERR11G07100 I 0.696
Pavir.J26137 Panicum virgatum Pavir.J26137 I 0.695
BGIOSGA034227 Oryza indica BGIOSGA034227 I 0.695
Pavir.J22217 Panicum virgatum Pavir.J22217 I 0.695
BRADI4G21265 Brachypodium distachyon BRADI4G21265 I 0.695
OPUNC11G07750 Oryza punctata OPUNC11G07750 I 0.695
ORGLA11G0070000 Oryza glaberrima ORGLA11G0070000 I 0.695
ORUFI11G08240 Oryza rufipogon ORUFI11G08240 I 0.695
OS11G0242300 Oryza sativa OS11G0242300 I 0.695
ONIVA11G08160 Oryza nivara ONIVA11G08160 I 0.695
OMERI11G06840 Oryza meridionalis OMERI11G06840 I 0.695
GSMUA_Achr2G20760_001 Musa acuminata GSMUA_Achr2G20760_001 I 0.695
OB11G16300 Oryza brachyantha OB11G16300 I 0.695
OGLUM11G07800 Oryza glumaepatula OGLUM11G07800 I 0.695
Sb05g007135 Sorghum bicolor Sb05g007135 I 0.695
Traes_4DS_97AC77E13 Triticum aestivum Traes_4DS_97AC77E13 I 0.690
MLOC_55144 Hordeum vulgare MLOC_55144 I 0.690
F775_17299 Aegilops tauschii F775_17299 I 0.690
Traes_4BS_DD5E68382 Triticum aestivum Traes_4BS_DD5E68382 I 0.690
Traes_4AL_D2D7703821 Triticum aestivum Traes_4AL_D2D7703821 I 0.690
TRIUR3_32331 Triticum urartu TRIUR3_32331 I 0.690
Ca_15064 Cicer arietinum Ca_15064 I 0.689
GSMUA_Achr11G12650_001 Musa acuminata GSMUA_Achr11G12650_001 N 0.686
SapurV1A.0601s0170 Salix purpurea SapurV1A.0601s0170 N 0.683
GSMUA_Achr8G16250_001 Musa acuminata GSMUA_Achr8G16250_001 I 0.678