Gorai.010G091100 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.010G091100 T008670_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.787 0.880
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.787 0.880
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.785 0.900
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.785 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G091100.1 AP2 16 67

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.811
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.811
29739.m003716 Ricinus communis 29739.m003716 I 0.809
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.809
Pm027117 Prunus mume Pm027117 I 0.809
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.805
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.803
TCM_037415 Theobroma cacao TCM_037415 I 0.802
TCM_037486 Theobroma cacao TCM_037486 I 0.800
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.800
Cla011318 Citrullus lanatus Cla011318 I 0.799
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.799
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.798
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.797
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.796
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.796
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.796
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.796
Bo8g068370 Brassica oleracea Bo8g068370 I 0.795
Bra016518 Brassica rapa Bra016518 I 0.795
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.795
Bo8g102870 Brassica oleracea Bo8g102870 I 0.794
Bra031069 Brassica rapa Bra031069 I 0.794
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.794
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.793
MDP0000649022 Malus domestica MDP0000649022 I 0.793
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.792
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.792
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.790
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.789
Ca_01683 Cicer arietinum Ca_01683 I 0.788
mgf024162m Mimulus guttatus mgf024162m I 0.788
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.788
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.788
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.787
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.787
ERF018 Arabidopsis thaliana AT1G74930 D 0.787
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.787
Ca_09124 Cicer arietinum Ca_09124 I 0.786
MDP0000704216 Malus domestica MDP0000704216 I 0.786
Bra015882 Brassica rapa Bra015882 I 0.786
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.785
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.785
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.785
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.785
ERF017 Arabidopsis thaliana AT1G19210 D 0.785
mgf021940m Mimulus guttatus mgf021940m I 0.784
Bo6g119120 Brassica oleracea Bo6g119120 I 0.783
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.782
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.782
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.782
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.782
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.781
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.780
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.779
Bo6g086740 Brassica oleracea Bo6g086740 I 0.779
Bra003780 Brassica rapa Bra003780 I 0.779
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.779
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.778
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.778
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.778
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.778
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.778
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.777
29739.m003647 Ricinus communis 29739.m003647 I 0.777
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.776
Cla007584 Citrullus lanatus Cla007584 I 0.775
mgf025452m Mimulus guttatus mgf025452m I 0.775
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.775
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.773
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.773
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.772
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.768
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.767
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.766
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.766
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.765
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.765
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.765
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.765
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.764
Si019636m.g Setaria italica Si019636m.g I 0.764
Ca_19295 Cicer arietinum Ca_19295 I 0.763
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.761
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.761
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.761
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.761
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.761
Bra025719 Brassica rapa Bra025719 I 0.758
Ca_19296 Cicer arietinum Ca_19296 I 0.757
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.756
Ca_19297 Cicer arietinum Ca_19297 I 0.756
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.754
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.754
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.754
Bo3g015600 Brassica oleracea Bo3g015600 I 0.748
Bra006599 Brassica rapa Bra006599 I 0.748
Bra002377 Brassica rapa Bra002377 I 0.747
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.747
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.747
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.747
Bo9g149820 Brassica oleracea Bo9g149820 I 0.747
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.746
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.746
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.744
PK18548.1 Cannabis sativa PK18548.1 I 0.743
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.742
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.741
ERF016 Arabidopsis thaliana AT5G21960 I 0.741
Cla022291 Citrullus lanatus Cla022291 I 0.740
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.740
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.739
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.739
Bo2g023630 Brassica oleracea Bo2g023630 I 0.737
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.736
Bra020162 Brassica rapa Bra020162 I 0.736
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.735
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.733
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.729
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.729
OS02G0781300 Oryza sativa OS02G0781300 I 0.725
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.725
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.725
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.725
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.725
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.725
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.725
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.725
Si008104m.g Setaria italica Si008104m.g I 0.716
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.712
OBART08G16950 Oryza barthii OBART08G16950 I 0.709
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.709
OB08G24280 Oryza brachyantha OB08G24280 I 0.709
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.709
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.709
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.709
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.709
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.709
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.709
Si015027m.g Setaria italica Si015027m.g I 0.709
OS08G0454000 Oryza sativa OS08G0454000 I 0.709
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.709
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.709
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.702
BRADI3G37544 Brachypodium distachyon BRADI3G37544 I 0.700
F775_23111 Aegilops tauschii F775_23111 I 0.700
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.699
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.695
AMTR_s00007p00268460 Amborella trichopoda AMTR_s00007p00268460 I 0.684
Aquca_076_00040 Aquilegia coerulea Aquca_076_00040 I 0.682