Gorai.011G291900 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.011G291900 T008698_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.731 0.880
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.731 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G291900.1 AP2 50 101

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_1288.2 Carica papaya evm.TU.supercontig_1288.2 I 0.773
29814.m000739 Ricinus communis 29814.m000739 I 0.756
cassava41265.m1 Manihot esculenta cassava41265.m1 I 0.756
GLYMA14G06290 Glycine max GLYMA14G06290 I 0.756
Pm018953 Prunus mume Pm018953 I 0.756
TCM_042471 Theobroma cacao TCM_042471 I 0.756
PGSC0003DMG400034739 Solanum tuberosum PGSC0003DMG400034739 I 0.756
POPTR_0008s07120 Populus trichocarpa POPTR_0008s07120 I 0.756
PRUPE_ppa015230mg Prunus persica PRUPE_ppa015230mg I 0.756
PGSC0003DMG400041883 Solanum tuberosum PGSC0003DMG400041883 I 0.756
GLYMA02G43240 Glycine max GLYMA02G43240 I 0.756
MDP0000225376 Malus domestica MDP0000225376 I 0.756
SapurV1A.0061s0480 Salix purpurea SapurV1A.0061s0480 I 0.756
orange1.1g038194m.g Citrus sinensis orange1.1g038194m.g I 0.756
gene21003-v1.0-hybrid Fragaria vesca gene21003-v1.0-hybrid I 0.756
Ciclev10033578m.g Citrus clementina Ciclev10033578m.g I 0.756
AMTR_s00007p00053050 Amborella trichopoda AMTR_s00007p00053050 I 0.753
mgf024416m Mimulus guttatus mgf024416m I 0.753
ABI4 Vitis vinifera VIT_13s0067g01400 I 0.747
chr2.CM0002.60.nc Lotus japonicus chr2.CM0002.60.nc I 0.747
Cla006708 Citrullus lanatus Cla006708 I 0.747
MDP0000628484 Malus domestica MDP0000628484 I 0.747
cassava20838.m1 Manihot esculenta cassava20838.m1 I 0.747
Cagra.7053s0005 Capsella grandiflora Cagra.7053s0005 I 0.743
Bostr.23794s0036 Boechera stricta Bostr.23794s0036 I 0.743
Thhalv10017614m.g Eutrema salsugineum Thhalv10017614m.g I 0.743
Carubv10025253m.g Capsella rubella Carubv10025253m.g I 0.743
ABI4 Arabidopsis lyrata Al_scaffold_0004_2621 I 0.743
POPTR_0010s19370 Populus trichocarpa POPTR_0010s19370 I 0.743
Bo4g025410 Brassica oleracea Bo4g025410 I 0.743
MTR_5g082950 Medicago truncatula MTR_5g082950 I 0.743
Bra004978 Brassica rapa Bra004978 I 0.743
ABI4 Arabidopsis thaliana AT2G40220 I 0.743
Bo3g034810 Brassica oleracea Bo3g034810 I 0.743
Bra000178 Brassica rapa Bra000178 I 0.743
Lus10009834.g Linum usitatissimum Lus10009834.g I 0.740
Lus10040944.g Linum usitatissimum Lus10040944.g I 0.740
Ca_12465 Cicer arietinum Ca_12465 I 0.740
SapurV1A.0650s0090 Salix purpurea SapurV1A.0650s0090 I 0.738
GSMUA_Achr3G10100_001 Musa acuminata GSMUA_Achr3G10100_001 I 0.733
GSMUA_Achr9G18060_001 Musa acuminata GSMUA_Achr9G18060_001 I 0.733
Pavir.J38620 Panicum virgatum Pavir.J38620 I 0.731
Pavir.J29572 Panicum virgatum Pavir.J29572 I 0.731
Pavir.J33237 Panicum virgatum Pavir.J33237 I 0.731
abi4 Zea mays GRMZM2G093595 D 0.731
OMERI05G11540 Oryza meridionalis OMERI05G11540 I 0.731
ONIVA05G13490 Oryza nivara ONIVA05G13490 I 0.731
Sb09g016550 Sorghum bicolor Sb09g016550 I 0.731
OPUNC05G11000 Oryza punctata OPUNC05G11000 I 0.731
ABI4 Oryza sativa OS05G0351200 I 0.731
OGLUM05G13600 Oryza glumaepatula OGLUM05G13600 I 0.731
BGIOSGA018232 Oryza indica BGIOSGA018232 I 0.731
GSMUA_Achr5G07400_001 Musa acuminata GSMUA_Achr5G07400_001 I 0.731
LPERR05G10140 Leersia perrieri LPERR05G10140 I 0.731
ORGLA05G0109500 Oryza glaberrima ORGLA05G0109500 I 0.731
Bo6g073020 Brassica oleracea Bo6g073020 I 0.691
Bra014617 Brassica rapa Bra014617 I 0.685
Bo4g111040 Brassica oleracea Bo4g111040 I 0.685
Bra007341 Brassica rapa Bra007341 I 0.681
Bo8g092010 Brassica oleracea Bo8g092010 I 0.681
Thhalv10006489m.g Eutrema salsugineum Thhalv10006489m.g I 0.681