Gorai.013G003400 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.013G003400 T008705_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.686 0.712
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.686 0.712
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G003400.1 AP2 79 139
Gorai.013G003400.1 AP2 181 232

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

388 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action