Gorai.013G222700 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.013G222700 T008713_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.777 0.860
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.777 0.860
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.770 0.860
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.770 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G222700.1 AP2 34 85

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g102870 Brassica oleracea Bo8g102870 I 0.781
Bra031069 Brassica rapa Bra031069 I 0.781
mgf021940m Mimulus guttatus mgf021940m I 0.780
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.780
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.779
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.778
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.778
TCM_037486 Theobroma cacao TCM_037486 I 0.778
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.777
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.777
ERF018 Arabidopsis thaliana AT1G74930 D 0.777
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.775
mgf024162m Mimulus guttatus mgf024162m I 0.775
Bo6g119120 Brassica oleracea Bo6g119120 I 0.774
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.770
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.770
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.770
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.770
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.770
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.770
Bra003780 Brassica rapa Bra003780 I 0.770
ERF017 Arabidopsis thaliana AT1G19210 D 0.770
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.770
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.770
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.769
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.769
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.769
Ca_09124 Cicer arietinum Ca_09124 I 0.769
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.769
Bo6g086740 Brassica oleracea Bo6g086740 I 0.769
Bra015882 Brassica rapa Bra015882 I 0.769
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.768
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.767
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.767
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.767
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.767
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.767
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.766
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.766
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.766
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.766
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.766
MDP0000704216 Malus domestica MDP0000704216 I 0.766
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.766
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.766
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.765
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.764
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.763
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.763
29739.m003716 Ricinus communis 29739.m003716 I 0.763
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.763
Pm027117 Prunus mume Pm027117 I 0.763
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.762
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.760
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.760
MDP0000649022 Malus domestica MDP0000649022 I 0.760
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.760
mgf025452m Mimulus guttatus mgf025452m I 0.759
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.759
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.758
Gorai.004G285200 Gossypium raimondii Gorai.004G285200 I 0.757
Bra016518 Brassica rapa Bra016518 I 0.757
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.757
Bo8g068370 Brassica oleracea Bo8g068370 I 0.757
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.757
Cla007584 Citrullus lanatus Cla007584 I 0.756
TCM_037415 Theobroma cacao TCM_037415 I 0.756
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.753
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.753
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.753
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.752
29739.m003647 Ricinus communis 29739.m003647 I 0.748
Ca_01683 Cicer arietinum Ca_01683 I 0.748
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.748
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.746
Bra025719 Brassica rapa Bra025719 I 0.746
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.745
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.745
Si019636m.g Setaria italica Si019636m.g I 0.745
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.745
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.745
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.744
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.744
Cla011318 Citrullus lanatus Cla011318 I 0.744
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.741
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.736
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.736
Bra020162 Brassica rapa Bra020162 I 0.732
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.729
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.729
Ca_19295 Cicer arietinum Ca_19295 I 0.729
Ca_19297 Cicer arietinum Ca_19297 I 0.728
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.727
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.727
PK18548.1 Cannabis sativa PK18548.1 I 0.724
Bo2g023630 Brassica oleracea Bo2g023630 I 0.724
Ca_19296 Cicer arietinum Ca_19296 I 0.724
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.723
LPERR02G28660 Leersia perrieri LPERR02G28660 I 0.722
Bra002377 Brassica rapa Bra002377 I 0.718
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.718
Bo9g149820 Brassica oleracea Bo9g149820 I 0.718
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.718
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.718
Si008104m.g Setaria italica Si008104m.g I 0.716
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.713
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.713
ERF016 Arabidopsis thaliana AT5G21960 I 0.712
Thhalv10015465m.g Eutrema salsugineum Thhalv10015465m.g I 0.712
Cla022291 Citrullus lanatus Cla022291 I 0.711
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.711
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.711
Bo3g015600 Brassica oleracea Bo3g015600 I 0.709
Bra006599 Brassica rapa Bra006599 I 0.709
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.706
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.705
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.705
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.700
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.700
MTR_2g043020 Medicago truncatula MTR_2g043020 I 0.699
MTR_1g014780 Medicago truncatula MTR_1g014780 I 0.698
OS02G0781300 Oryza sativa OS02G0781300 I 0.686
ORGLA02G0301600 Oryza glaberrima ORGLA02G0301600 I 0.686
ORUFI02G36340 Oryza rufipogon ORUFI02G36340 I 0.686
BGIOSGA005486 Oryza indica BGIOSGA005486 I 0.686
OGLUM02G35980 Oryza glumaepatula OGLUM02G35980 I 0.686
OPUNC02G32160 Oryza punctata OPUNC02G32160 I 0.686
OMERI01G37050 Oryza meridionalis OMERI01G37050 I 0.686
ONIVA02G36910 Oryza nivara ONIVA02G36910 I 0.686
Traes_6AL_E6DAE246D Triticum aestivum Traes_6AL_E6DAE246D I 0.684
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.678