Lus10001553.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10001553.g T008719_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10001553 AP2 60 117
Lus10001553 AP2 159 211

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

283 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.907
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.907
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.907
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.907
TCM_038442 Theobroma cacao TCM_038442 N 0.902
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.902
MDP0000133423 Malus domestica MDP0000133423 N 0.902
MDP0000318457 Malus domestica MDP0000318457 N 0.902
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.902
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.900
Cla019044 Citrullus lanatus Cla019044 N 0.898
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.897
Pm013856 Prunus mume Pm013856 N 0.897
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.896
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.896
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.896
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.896
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.896
MDP0000231748 Malus domestica MDP0000231748 N 0.896
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.896
Pm008629 Prunus mume Pm008629 I 0.896
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.896
OBART09G10730 Oryza barthii OBART09G10730 N 0.895
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.895
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.895
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.895
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.895
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.895
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.895
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.895
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.895
TCM_027569 Theobroma cacao TCM_027569 I 0.894
Si030129m.g Setaria italica Si030129m.g I 0.894
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.892
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.892
OS09G0423800 Oryza sativa OS09G0423800 I 0.892
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.892
OB09G17420 Oryza brachyantha OB09G17420 I 0.892
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.892
Cla015555 Citrullus lanatus Cla015555 N 0.891
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.891
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.891
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.889
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.889
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.888
PK26651.1 Cannabis sativa PK26651.1 I 0.887
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.886
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.886
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.885
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.884
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.883
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.882
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.882
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.880
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.880
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.880
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.880
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.880
Ca_17532 Cicer arietinum Ca_17532 N 0.879
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.879
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.878
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.876
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.875
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.873
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.871
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.871
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.868
Ca_03306 Cicer arietinum Ca_03306 N 0.867
30114.m000507 Ricinus communis 30114.m000507 N 0.864
Bo6g124080 Brassica oleracea Bo6g124080 N 0.864
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.863
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.863
30069.m000440 Ricinus communis 30069.m000440 N 0.862
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.861
Pm017032 Prunus mume Pm017032 N 0.860
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.860
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.860
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.860
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.860
Bo8g083590 Brassica oleracea Bo8g083590 I 0.860
WRI1 Arabidopsis thaliana AT3G54320 I 0.860
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.860
Bra007066 Brassica rapa Bra007066 N 0.860
Bo6g067950 Brassica oleracea Bo6g067950 I 0.859
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.859
Bra003178 Brassica rapa Bra003178 N 0.859
Bra035137 Brassica rapa Bra035137 I 0.858
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.858
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.858
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.858
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.856
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.855
Bo5g021520 Brassica oleracea Bo5g021520 N 0.855
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.853
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.853
ADAP Arabidopsis thaliana AT1G16060 I 0.852
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.852
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.851
mgf017413m Mimulus guttatus mgf017413m N 0.850
PK04008.1 Cannabis sativa PK04008.1 I 0.849
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.849
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.849
Bra026082 Brassica rapa Bra026082 I 0.849
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.849
TCM_044588 Theobroma cacao TCM_044588 I 0.848
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.848
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.848
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.847
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.846
OS08G0442400 Oryza sativa OS08G0442400 I 0.846
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.846
mgf019116m Mimulus guttatus mgf019116m N 0.846
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.844
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.844
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.844
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.844
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.844
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.843
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.842
Si026433m.g Setaria italica Si026433m.g N 0.842
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.842
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.842
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.842
Si012026m.g Setaria italica Si012026m.g N 0.842
Cla020765 Citrullus lanatus Cla020765 N 0.842
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.842
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.839
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.838
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.836
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.836
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.835
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.833
mg013664m Mimulus guttatus mg013664m N 0.832
Ca_20689 Cicer arietinum Ca_20689 N 0.832
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.832
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.831
TCM_018386 Theobroma cacao TCM_018386 N 0.829
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.828
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.827
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.827
Lus10030671.g Linum usitatissimum Lus10030671.g N 0.827
mgf019814m Mimulus guttatus mgf019814m N 0.825
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.824
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.824
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.824
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.822
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.822
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.822
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.822
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.822
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.821
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.820
Si007857m.g Setaria italica Si007857m.g N 0.820
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.819
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.819
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.819
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.819
29822.m003477 Ricinus communis 29822.m003477 N 0.819
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.818
mgf008907m Mimulus guttatus mgf008907m I 0.818
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.817
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.817
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.817
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.817
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.817
OBART06G03040 Oryza barthii OBART06G03040 N 0.817
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.817
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.817
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.816
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.816
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.815
Ca_10533 Cicer arietinum Ca_10533 N 0.814
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.813
MDP0000166059 Malus domestica MDP0000166059 N 0.813
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.812
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.812
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.811
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.809
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.809
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.809
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.809
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.808
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.808
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.808
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.808
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.808
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.808
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.807
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.807
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.807
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.807
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.807
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.807
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.807
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.807
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.807
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.807
MDP0000281784 Malus domestica MDP0000281784 I 0.806
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.805
MDP0000186581 Malus domestica MDP0000186581 N 0.805
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.805
PK24809.1 Cannabis sativa PK24809.1 I 0.805
MDP0000297698 Malus domestica MDP0000297698 N 0.805
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.805
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.805
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.805
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.804
OS06G0145700 Oryza sativa OS06G0145700 N 0.804
OB12G11690 Oryza brachyantha OB12G11690 I 0.803
OB11G11380 Oryza brachyantha OB11G11380 I 0.803
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.803
OS12G0126300 Oryza sativa OS12G0126300 I 0.803
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.803
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.802
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.802
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.802
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.802
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.802
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.801
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.801
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.801
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.799
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.799
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.798
Si022186m.g Setaria italica Si022186m.g I 0.797
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.797
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.797
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.797
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.797
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.797
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.797
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.795
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.795
Pm015847 Prunus mume Pm015847 N 0.795
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.794
Pm006561 Prunus mume Pm006561 N 0.793
MDP0000206674 Malus domestica MDP0000206674 N 0.793
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.793
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.791
F775_02400 Aegilops tauschii F775_02400 I 0.791
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.791
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.790
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.789
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.787
F775_06373 Aegilops tauschii F775_06373 N 0.786
TCM_011797 Theobroma cacao TCM_011797 N 0.785
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.784
Pm015843 Prunus mume Pm015843 N 0.782
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.781
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.778
OS05G0536250 Oryza sativa OS05G0536250 I 0.778
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.778
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.778
OB05G31600 Oryza brachyantha OB05G31600 I 0.778
OBART12G01740 Oryza barthii OBART12G01740 N 0.777
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.776
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.775
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.774
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.774
F775_02064 Aegilops tauschii F775_02064 N 0.773
Si013842m.g Setaria italica Si013842m.g N 0.773
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.773
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.769
Cla017294 Citrullus lanatus Cla017294 N 0.762
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.758
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.756
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.749
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.736
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.734
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.731
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.731
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.729
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.722
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.722
OB08G23780 Oryza brachyantha OB08G23780 N 0.720
OB01G43640 Oryza brachyantha OB01G43640 N 0.717
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.715
LPERR01G30020 Leersia perrieri LPERR01G30020 N 0.703
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.703
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.692
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.689
GSMUA_Achr1G24940_001 Musa acuminata GSMUA_Achr1G24940_001 I 0.683
Lus10005513.g Linum usitatissimum Lus10005513.g N 0.574