Lus10030671.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10030671.g T008875_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10030671 AP2 85 145
Lus10030671 AP2 187 239

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

291 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10005253.g Linum usitatissimum Lus10005253.g N 0.927
TCM_018386 Theobroma cacao TCM_018386 N 0.917
orange1.1g042319m.g Citrus sinensis orange1.1g042319m.g N 0.909
Eucgr.J02131 Eucalyptus grandis Eucgr.J02131 N 0.909
Ciclev10013824m.g Citrus clementina Ciclev10013824m.g N 0.909
gene01262-v1.0-hybrid Fragaria vesca gene01262-v1.0-hybrid I 0.892
Eucgr.I01921 Eucalyptus grandis Eucgr.I01921 N 0.891
GLYMA09G37540 Glycine max GLYMA09G37540 N 0.890
Solyc06g066390.1 Solanum lycopersicum Solyc06g066390.1 N 0.890
GLYMA18G16236 Glycine max GLYMA18G16236 N 0.890
Lus10013268.g Linum usitatissimum Lus10013268.g N 0.889
PK24809.1 Cannabis sativa PK24809.1 I 0.888
GLYMA18G49101 Glycine max GLYMA18G49101 N 0.887
GLYMA08G40831 Glycine max GLYMA08G40831 N 0.887
Aquca_074_00065 Aquilegia coerulea Aquca_074_00065 I 0.886
PGSC0003DMG400002399 Solanum tuberosum PGSC0003DMG400002399 N 0.881
BRADI2G48130 Brachypodium distachyon BRADI2G48130 N 0.881
MDP0000281784 Malus domestica MDP0000281784 I 0.881
Lus10030792.g Linum usitatissimum Lus10030792.g N 0.881
Si007857m.g Setaria italica Si007857m.g N 0.880
Traes_7AS_A70A185F1 Triticum aestivum Traes_7AS_A70A185F1 N 0.880
MDP0000206674 Malus domestica MDP0000206674 N 0.878
ORUFI06G03000 Oryza rufipogon ORUFI06G03000 N 0.877
Sb10g003160 Sorghum bicolor Sb10g003160 N 0.877
ORGLA06G0029800 Oryza glaberrima ORGLA06G0029800 N 0.877
GRMZM2G073982 Zea mays GRMZM2G073982 N 0.877
Pavir.J19507 Panicum virgatum Pavir.J19507 N 0.877
BGIOSGA021927 Oryza indica BGIOSGA021927 N 0.877
ONIVA06G03970 Oryza nivara ONIVA06G03970 N 0.877
OBART06G03040 Oryza barthii OBART06G03040 N 0.877
cassava39084.m1 Manihot esculenta cassava39084.m1 I 0.874
MDP0000297698 Malus domestica MDP0000297698 N 0.873
MDP0000186581 Malus domestica MDP0000186581 N 0.873
Lus10036719.g Linum usitatissimum Lus10036719.g I 0.872
Lus10037209.g Linum usitatissimum Lus10037209.g I 0.872
GSMUA_Achr3G03630_001 Musa acuminata GSMUA_Achr3G03630_001 I 0.869
Bra035137 Brassica rapa Bra035137 I 0.867
PDK_20s13009417g005 Phoenix dactylifera PDK_20s13009417g005 N 0.867
GRMZM2G141219 Zea mays GRMZM2G141219 I 0.867
BRADI2G18570 Brachypodium distachyon BRADI2G18570 I 0.866
Pavir.Bb02213 Panicum virgatum Pavir.Bb02213 I 0.866
TRIUR3_01982 Triticum urartu TRIUR3_01982 I 0.866
F775_02400 Aegilops tauschii F775_02400 I 0.866
GLYMA08G23630 Glycine max GLYMA08G23630 I 0.864
GLYMA07G02380 Glycine max GLYMA07G02380 I 0.864
Bostr.20129s0410 Boechera stricta Bostr.20129s0410 I 0.861
Solyc03g117720.2 Solanum lycopersicum Solyc03g117720.2 I 0.861
OS09G0423800 Oryza sativa OS09G0423800 I 0.860
OB09G17420 Oryza brachyantha OB09G17420 I 0.860
BGIOSGA030783 Oryza indica BGIOSGA030783 I 0.860
OGLUM09G11130 Oryza glumaepatula OGLUM09G11130 I 0.860
ONIVA09G10420 Oryza nivara ONIVA09G10420 I 0.860
ORGLA09G0079700 Oryza glaberrima ORGLA09G0079700 I 0.860
Si030129m.g Setaria italica Si030129m.g I 0.860
Sb02g025080 Sorghum bicolor Sb02g025080 I 0.860
fgenesh2_kg.2__2276__AT1G79700.2 Arabidopsis lyrata fgenesh2_kg.2__2276__AT1G79700.2 I 0.860
Cucsa.170790 Cucumis sativus Cucsa.170790 I 0.858
AT1G79700 Arabidopsis thaliana AT1G79700 I 0.857
AMTR_s00019p00086450 Amborella trichopoda AMTR_s00019p00086450 I 0.857
GRMZM2G113078 Zea mays GRMZM2G113078 I 0.855
SapurV1A.1603s0090 Salix purpurea SapurV1A.1603s0090 I 0.855
SapurV1A.1535s0040 Salix purpurea SapurV1A.1535s0040 I 0.855
Eucgr.F03987 Eucalyptus grandis Eucgr.F03987 I 0.855
OMERI01G26790 Oryza meridionalis OMERI01G26790 I 0.855
LPERR05G19870 Leersia perrieri LPERR05G19870 I 0.855
POPTR_0001s03300 Populus trichocarpa POPTR_0001s03300 I 0.855
Aquca_002_00506 Aquilegia coerulea Aquca_002_00506 I 0.855
Pavir.J02216 Panicum virgatum Pavir.J02216 I 0.855
Si022186m.g Setaria italica Si022186m.g I 0.855
Pavir.J34675 Panicum virgatum Pavir.J34675 I 0.855
Sb09g026800 Sorghum bicolor Sb09g026800 I 0.855
evm.TU.supercontig_199.10 Carica papaya evm.TU.supercontig_199.10 I 0.854
TCM_027569 Theobroma cacao TCM_027569 I 0.854
VIT_09s0018g01650 Vitis vinifera VIT_09s0018g01650 I 0.854
SapurV1A.0153s0330 Salix purpurea SapurV1A.0153s0330 I 0.854
PRUPE_ppa023152mg Prunus persica PRUPE_ppa023152mg I 0.854
Gorai.012G098200 Gossypium raimondii Gorai.012G098200 I 0.854
Pm008629 Prunus mume Pm008629 I 0.854
Aquca_048_00034 Aquilegia coerulea Aquca_048_00034 I 0.854
BRADI4G30617 Brachypodium distachyon BRADI4G30617 I 0.853
Gorai.001G256900 Gossypium raimondii Gorai.001G256900 N 0.853
Traes_5BL_B6C71B544 Triticum aestivum Traes_5BL_B6C71B544 I 0.853
Aquca_016_00348 Aquilegia coerulea Aquca_016_00348 I 0.851
PK26651.1 Cannabis sativa PK26651.1 I 0.851
Traes_4AL_C863DCEDC Triticum aestivum Traes_4AL_C863DCEDC N 0.851
OS06G0145700 Oryza sativa OS06G0145700 N 0.851
Gorai.009G122000 Gossypium raimondii Gorai.009G122000 I 0.850
Cagra.1725s0044 Capsella grandiflora Cagra.1725s0044 I 0.849
Bra026082 Brassica rapa Bra026082 I 0.847
OS08G0442400 Oryza sativa OS08G0442400 I 0.847
ORGLA08G0142100 Oryza glaberrima ORGLA08G0142100 I 0.847
BGIOSGA028751 Oryza indica BGIOSGA028751 I 0.847
Ciclev10025985m.g Citrus clementina Ciclev10025985m.g I 0.845
ADAP Arabidopsis thaliana AT1G16060 I 0.845
orange1.1g018990m.g Citrus sinensis orange1.1g018990m.g I 0.845
Lus10024101.g Linum usitatissimum Lus10024101.g I 0.844
Bo6g067950 Brassica oleracea Bo6g067950 I 0.844
Lus10041618.g Linum usitatissimum Lus10041618.g I 0.844
Bo8g083590 Brassica oleracea Bo8g083590 I 0.844
OMERI06G03270 Oryza meridionalis OMERI06G03270 N 0.844
Carubv10018845m.g Capsella rubella Carubv10018845m.g I 0.843
MTR_8g468920 Medicago truncatula MTR_8g468920 N 0.843
WRI1 Arabidopsis thaliana AT3G54320 I 0.843
Cagra.0562s0024 Capsella grandiflora Cagra.0562s0024 I 0.843
Bostr.0697s0045 Boechera stricta Bostr.0697s0045 I 0.843
Thhalv10008118m.g Eutrema salsugineum Thhalv10008118m.g I 0.843
evm.TU.contig_28586.3 Carica papaya evm.TU.contig_28586.3 N 0.843
Gorai.006G025100 Gossypium raimondii Gorai.006G025100 N 0.842
GLYMA02G36880 Glycine max GLYMA02G36880 I 0.842
GLYMA17G07860 Glycine max GLYMA17G07860 I 0.842
Sb05g001790 Sorghum bicolor Sb05g001790 I 0.840
GRMZM2G124524 Zea mays GRMZM2G124524 I 0.840
evm.TU.supercontig_14.38 Carica papaya evm.TU.supercontig_14.38 N 0.838
Gorai.009G008800 Gossypium raimondii Gorai.009G008800 I 0.838
TCM_044588 Theobroma cacao TCM_044588 I 0.837
Gorai.011G225700 Gossypium raimondii Gorai.011G225700 I 0.837
Ca_20689 Cicer arietinum Ca_20689 N 0.837
PK04008.1 Cannabis sativa PK04008.1 I 0.837
mg013664m Mimulus guttatus mg013664m N 0.835
Eucgr.B03412 Eucalyptus grandis Eucgr.B03412 I 0.834
Bo6g124080 Brassica oleracea Bo6g124080 N 0.834
MTR_6g011490 Medicago truncatula MTR_6g011490 N 0.833
mgf019814m Mimulus guttatus mgf019814m N 0.832
Cla019044 Citrullus lanatus Cla019044 N 0.831
Pm013856 Prunus mume Pm013856 N 0.831
PRUPE_ppa007768mg Prunus persica PRUPE_ppa007768mg N 0.831
OLONG_002862 Oryza longistaminata OLONG_002862 N 0.831
Cla017294 Citrullus lanatus Cla017294 N 0.830
OMERI09G08520 Oryza meridionalis OMERI09G08520 N 0.830
gene15913-v1.0-hybrid Fragaria vesca gene15913-v1.0-hybrid N 0.830
OBART09G10730 Oryza barthii OBART09G10730 N 0.830
MDP0000231748 Malus domestica MDP0000231748 N 0.830
LPERR09G07570 Leersia perrieri LPERR09G07570 N 0.830
ORUFI09G11510 Oryza rufipogon ORUFI09G11510 N 0.830
AMTR_s00101p00022740 Amborella trichopoda AMTR_s00101p00022740 N 0.829
cassava11368.m1 Manihot esculenta cassava11368.m1 N 0.828
29822.m003477 Ricinus communis 29822.m003477 N 0.828
PRUPE_ppa024318mg Prunus persica PRUPE_ppa024318mg N 0.828
chr2.CM0608.630.nc Lotus japonicus chr2.CM0608.630.nc N 0.828
POPTR_0017s11470 Populus trichocarpa POPTR_0017s11470 N 0.828
OB05G31600 Oryza brachyantha OB05G31600 I 0.828
gene27659-v1.0-hybrid Fragaria vesca gene27659-v1.0-hybrid N 0.827
chr6.CM0041.30.nd Lotus japonicus chr6.CM0041.30.nd N 0.827
Ca_17532 Cicer arietinum Ca_17532 N 0.827
Lus10001553.g Linum usitatissimum Lus10001553.g N 0.827
TCM_038442 Theobroma cacao TCM_038442 N 0.827
MTR_2g460730 Medicago truncatula MTR_2g460730 N 0.827
Ciclev10010237m.g Citrus clementina Ciclev10010237m.g N 0.827
MDP0000318457 Malus domestica MDP0000318457 N 0.827
POPTR_0018s11110 Populus trichocarpa POPTR_0018s11110 N 0.827
GLYMA06G30840 Glycine max GLYMA06G30840 N 0.827
Cucsa.282940 Cucumis sativus Cucsa.282940 N 0.827
SELMODRAFT_85823 Selaginella moellendorffii SELMODRAFT_85823 N 0.827
MDP0000133423 Malus domestica MDP0000133423 N 0.827
MTR_4g007770 Medicago truncatula MTR_4g007770 N 0.827
Cla015555 Citrullus lanatus Cla015555 N 0.826
Carubv10020688m.g Capsella rubella Carubv10020688m.g N 0.826
VIT_14s0108g00050 Vitis vinifera VIT_14s0108g00050 N 0.826
GLYMA04G24010 Glycine max GLYMA04G24010 N 0.826
PRUPE_ppa022243mg Prunus persica PRUPE_ppa022243mg N 0.825
Solyc06g068570.2 Solanum lycopersicum Solyc06g068570.2 I 0.825
Pm006561 Prunus mume Pm006561 N 0.825
GSMUA_Achr5G04670_001 Musa acuminata GSMUA_Achr5G04670_001 N 0.824
PRUPE_ppa022978mg Prunus persica PRUPE_ppa022978mg N 0.823
Cucsa.106090 Cucumis sativus Cucsa.106090 N 0.823
MTR_7g009410 Medicago truncatula MTR_7g009410 N 0.823
Pm015847 Prunus mume Pm015847 N 0.823
Ca_10533 Cicer arietinum Ca_10533 N 0.822
POPTR_0003s18350 Populus trichocarpa POPTR_0003s18350 N 0.822
VIT_01s0026g01690 Vitis vinifera VIT_01s0026g01690 N 0.822
Bo5g021520 Brassica oleracea Bo5g021520 N 0.820
MTR_4g130270 Medicago truncatula MTR_4g130270 I 0.819
OPUNC09G09320 Oryza punctata OPUNC09G09320 N 0.818
ADAP Arabidopsis lyrata fgenesh2_kg.1__1760__AT1G16060.1 N 0.818
Gorai.012G056300 Gossypium raimondii Gorai.012G056300 N 0.818
Traes_1BL_3EFA4A82D Triticum aestivum Traes_1BL_3EFA4A82D N 0.818
Bostr.7128s0222 Boechera stricta Bostr.7128s0222 N 0.818
cassava16315.m1 Manihot esculenta cassava16315.m1 N 0.817
TCM_011797 Theobroma cacao TCM_011797 N 0.817
BGIOSGA017664 Oryza indica BGIOSGA017664 I 0.815
OS05G0536250 Oryza sativa OS05G0536250 I 0.815
OLONG_014256 Oryza longistaminata OLONG_014256 I 0.815
POPTR_0010s10290 Populus trichocarpa POPTR_0010s10290 N 0.815
OPUNC05G21440 Oryza punctata OPUNC05G21440 I 0.815
F775_02064 Aegilops tauschii F775_02064 N 0.814
AMTR_s00202p00017170 Amborella trichopoda AMTR_s00202p00017170 N 0.814
evm.TU.supercontig_54.28 Carica papaya evm.TU.supercontig_54.28 N 0.813
chr2.CM0225.20.nc Lotus japonicus chr2.CM0225.20.nc N 0.811
Eucgr.J00316 Eucalyptus grandis Eucgr.J00316 I 0.811
30069.m000440 Ricinus communis 30069.m000440 N 0.811
ONIVA08G17820 Oryza nivara ONIVA08G17820 N 0.810
ORUFI08G18170 Oryza rufipogon ORUFI08G18170 N 0.810
Bra003178 Brassica rapa Bra003178 N 0.810
OMERI08G13500 Oryza meridionalis OMERI08G13500 N 0.810
LPERR08G13500 Leersia perrieri LPERR08G13500 N 0.810
OGLUM08G17060 Oryza glumaepatula OGLUM08G17060 N 0.810
Thhalv10010394m.g Eutrema salsugineum Thhalv10010394m.g N 0.809
Bra007066 Brassica rapa Bra007066 N 0.809
Carubv10010918m.g Capsella rubella Carubv10010918m.g N 0.809
Pm017032 Prunus mume Pm017032 N 0.809
30114.m000507 Ricinus communis 30114.m000507 N 0.809
GSMUA_Achr8G09350_001 Musa acuminata GSMUA_Achr8G09350_001 I 0.809
WRI1 Arabidopsis lyrata fgenesh2_kg.5__1822__AT3G54320.1 N 0.809
Gorai.013G003400 Gossypium raimondii Gorai.013G003400 I 0.807
orange1.1g036423m.g Citrus sinensis orange1.1g036423m.g N 0.807
Ciclev10003896m.g Citrus clementina Ciclev10003896m.g N 0.807
Gorai.008G182500 Gossypium raimondii Gorai.008G182500 N 0.807
mgf008907m Mimulus guttatus mgf008907m I 0.805
Si012026m.g Setaria italica Si012026m.g N 0.804
Traes_5AL_F8DEBE8E7 Triticum aestivum Traes_5AL_F8DEBE8E7 I 0.804
Eucgr.C00238 Eucalyptus grandis Eucgr.C00238 N 0.804
Traes_5DL_2CF55DD05 Triticum aestivum Traes_5DL_2CF55DD05 I 0.804
OPUNC08G14310 Oryza punctata OPUNC08G14310 N 0.804
Si026433m.g Setaria italica Si026433m.g N 0.804
GRMZM2G174834 Zea mays GRMZM2G174834 I 0.803
Ciclev10033673m.g Citrus clementina Ciclev10033673m.g N 0.803
Solyc01g096860.1 Solanum lycopersicum Solyc01g096860.1 I 0.802
SapurV1A.0036s0830 Salix purpurea SapurV1A.0036s0830 N 0.801
OB11G11380 Oryza brachyantha OB11G11380 I 0.800
OB12G11690 Oryza brachyantha OB12G11690 I 0.800
ORGLA11G0014900 Oryza glaberrima ORGLA11G0014900 I 0.800
BRADI4G43877 Brachypodium distachyon BRADI4G43877 I 0.800
OS12G0126300 Oryza sativa OS12G0126300 I 0.800
Cla020765 Citrullus lanatus Cla020765 N 0.799
Solyc12g010490.1 Solanum lycopersicum Solyc12g010490.1 N 0.799
VIT_11s0037g00870 Vitis vinifera VIT_11s0037g00870 N 0.798
mgf017413m Mimulus guttatus mgf017413m N 0.798
MTR_8g044070 Medicago truncatula MTR_8g044070 N 0.795
e_gw1.32.189.1 Physcomitrella patens e_gw1.32.189.1 N 0.794
MTR_8g044040 Medicago truncatula MTR_8g044040 N 0.794
Ca_03306 Cicer arietinum Ca_03306 N 0.792
Pm015843 Prunus mume Pm015843 N 0.790
SELMODRAFT_129793 Selaginella moellendorffii SELMODRAFT_129793 N 0.789
Thhalv10018877m.g Eutrema salsugineum Thhalv10018877m.g N 0.787
GLYMA08G24420 Glycine max GLYMA08G24420 N 0.786
GLYMA15G34770 Glycine max GLYMA15G34770 N 0.783
mgf019116m Mimulus guttatus mgf019116m N 0.780
Cagra.2238s0017 Capsella grandiflora Cagra.2238s0017 N 0.780
Lus10008939.g Linum usitatissimum Lus10008939.g N 0.779
gene00377-v1.0-hybrid Fragaria vesca gene00377-v1.0-hybrid N 0.778
TRIUR3_24036 Triticum urartu TRIUR3_24036 N 0.777
orange1.1g043551m.g Citrus sinensis orange1.1g043551m.g N 0.775
Lus10028880.g Linum usitatissimum Lus10028880.g N 0.775
SELMODRAFT_78076 Selaginella moellendorffii SELMODRAFT_78076 N 0.773
OMERI11G02080 Oryza meridionalis OMERI11G02080 N 0.769
ORGLA12G0015400 Oryza glaberrima ORGLA12G0015400 N 0.769
BGIOSGA034580 Oryza indica BGIOSGA034580 N 0.769
OPUNC11G01540 Oryza punctata OPUNC11G01540 N 0.769
BGIOSGA036704 Oryza indica BGIOSGA036704 N 0.769
OMERI12G00060 Oryza meridionalis OMERI12G00060 N 0.769
OPUNC12G01560 Oryza punctata OPUNC12G01560 N 0.769
ONIVA03G39530 Oryza nivara ONIVA03G39530 N 0.769
ONIVA11G01800 Oryza nivara ONIVA11G01800 N 0.769
F775_06373 Aegilops tauschii F775_06373 N 0.766
BRADI3G36820 Brachypodium distachyon BRADI3G36820 N 0.765
PGSC0003DMG400027502 Solanum tuberosum PGSC0003DMG400027502 N 0.764
POPTR_0006s19360 Populus trichocarpa POPTR_0006s19360 N 0.764
POPTR_0010s25340 Populus trichocarpa POPTR_0010s25340 N 0.761
GRMZM2G131266 Zea mays GRMZM2G131266 N 0.760
LPERR12G01610 Leersia perrieri LPERR12G01610 N 0.759
OBART12G01740 Oryza barthii OBART12G01740 N 0.755
MDP0000166059 Malus domestica MDP0000166059 N 0.751
TRIUR3_04644 Triticum urartu TRIUR3_04644 N 0.750
Sb07g021800 Sorghum bicolor Sb07g021800 N 0.739
SapurV1A.0070s0630 Salix purpurea SapurV1A.0070s0630 N 0.735
Pavir.J08481 Panicum virgatum Pavir.J08481 N 0.733
Si013842m.g Setaria italica Si013842m.g N 0.733
Pavir.J34903 Panicum virgatum Pavir.J34903 N 0.733
PDK_20s1726381g002 Phoenix dactylifera PDK_20s1726381g002 N 0.729
e_gw1.261.8.1 Physcomitrella patens e_gw1.261.8.1 N 0.725
SELMODRAFT_108361 Selaginella moellendorffii SELMODRAFT_108361 N 0.715
OPUNC06G02740 Oryza punctata OPUNC06G02740 N 0.714
WRI1 Vitis vinifera VIT_13s0047g00340 N 0.714
GSMUA_Achr3G32510_001 Musa acuminata GSMUA_Achr3G32510_001 N 0.714
POPTR_0008s01260 Populus trichocarpa POPTR_0008s01260 N 0.711
LjSGA_030627.1 Lotus japonicus LjSGA_030627.1 N 0.697
Pavir.Ba03911 Panicum virgatum Pavir.Ba03911 I 0.693
OB08G23780 Oryza brachyantha OB08G23780 N 0.690
Pavir.J24038 Panicum virgatum Pavir.J24038 I 0.689
GRMZM2G451031 Zea mays GRMZM2G451031 N 0.688
OB01G43640 Oryza brachyantha OB01G43640 N 0.686
GSMUA_Achr7G00740_001 Musa acuminata GSMUA_Achr7G00740_001 I 0.685
Sb03g037750 Sorghum bicolor Sb03g037750 N 0.685
Pavir.Ia03819 Panicum virgatum Pavir.Ia03819 I 0.684
GSMUA_Achr4G32280_001 Musa acuminata GSMUA_Achr4G32280_001 I 0.684
Pavir.Bb00216 Panicum virgatum Pavir.Bb00216 I 0.684
OGLUM11G01480 Oryza glumaepatula OGLUM11G01480 N 0.683
Pavir.Ia00425 Panicum virgatum Pavir.Ia00425 I 0.683
Traes_1DL_633B39E24 Triticum aestivum Traes_1DL_633B39E24 N 0.680
GSMUA_Achr3G09410_001 Musa acuminata GSMUA_Achr3G09410_001 N 0.680
Pavir.Ea03213 Panicum virgatum Pavir.Ea03213 N 0.677